Gene Francci3_1044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1044 
Symbol 
ID3906713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand- 
Start bp1239356 
End bp1239907 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content67% 
IMG OID637878378 
Producthypothetical protein 
Protein accessionYP_480155 
Protein GI86739755 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.367529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.873657 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTGGA ATGATCTGCC GACGCAGGTC CGCGACGCGG TTGAGGCGCA GACCGGACCC 
GTCACGTCCG CCGACTCGGT GGACGTCGGG GACGGCTGCG ACCTCGCCGC GGTCGTGGAT 
GCGGGTGAGC AGCGGCTGGT CGTCAAAGGC GTCCACGGCG GCGGCCGGCG AGCACGCTGG 
CTCCGTAACG AGCACACGTT CGGACACCTC GCCGCAGGAA TCACGCCGAG TCCACGGTTC 
GCATGCCAGG TCGATGACTG GCTGCTGGTT GGCTTCGAGC ATGCGACCGG CCAACCAGCG 
GACCTCATCC CCGGCTCTCC TGACCTACCC CGCGTCCGGG ACGTCGTCAA CGACATCTCC 
CGCCGGACCG GCGAGGGTCT GCGCTCGCTT TCCGATCGAT GGCGCAACAC GGGTTGGTGG 
GAGGATCTAA AAACGCTTTC AGCTAGAGTT TTCCCCGATT GGGACGTAGC CACCGCGGCC 
GTCCACGCGG GCGCTGTAGT CGACGCCGTG GCCGGGAACC GGCTGATTCA CACCGACCTT 
CATGCCCACT AG
 
Protein sequence
MKWNDLPTQV RDAVEAQTGP VTSADSVDVG DGCDLAAVVD AGEQRLVVKG VHGGGRRARW 
LRNEHTFGHL AAGITPSPRF ACQVDDWLLV GFEHATGQPA DLIPGSPDLP RVRDVVNDIS 
RRTGEGLRSL SDRWRNTGWW EDLKTLSARV FPDWDVATAA VHAGAVVDAV AGNRLIHTDL 
HAH