| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1037 |
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| Symbol | |
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| ID | 3906705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1232202 |
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| End bp | 1233011 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637878370 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_480148 |
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| Protein GI | 86739748 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0742911 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGGT CCGTTGCGAC GCGCAGGCCC GCCATGGCAC GCCGTGCCGC CGCCACGGCG
TTGACCCTGG GCGGCGCGGC CGGGCTCACC TACGGCATTC CGTCGCTCAC CACACTGCGT
CGACTACGGC TGCGGTGGAC GCCGGCGCTC GCAGGGCTCG GCGCGCCCGA TCACGTCGCG
CTCACCTTCG ACGATGGTCC GGATCCCGTG TCCACGCCAC AGTTTCTCGA CGTGCTCGCC
GAACTCGACG TGCGGGCGAC GTTCTTCGTC CTCGGTGGTC TGCTGGAACG CGCACCGACG
TTGGCGCGGG AGATGGCCGC CGCCGGGCAC GAGCTGGCCG TGCACGGCTG GGATCATCGC
CCGATGCTGT TGCGCGGTCC CCGCTCCACG CACGACCATC TCGCCCGCAC CCGGGACCTG
GTCGTCGAGA TCACCGGTCG CGCGCCGCGG TTCGTCCGGC CGCCGCACGG CATCCTCTCG
GCCGGGCTGC TCGTCGCGGC CCGCCGCCTC GACCTCAGCC CCGTCCTGTG GTCGGCATGG
GGACGCGACT GGACGGCCGA GGCGACGCCG GGCAGCGTGC TGGGCACCCT CGCCCCCGAC
CTGTGCGGGG GCGCCACGGT GCTGCTGCAC GACTGTGACT GCACATCGGC CCCCGGGGCC
TGGCGCAGCG CGCTCGGGGC TCTGCCCGGG ATCGCCGCGC GCTGCGACGA CGCCGGCCTG
CGCCTTGGAC CACTCGCCGA GCACGGCCTA CCGGCCTGGT CGAATCCTCC TTCTGGCAGG
AGCGGCCGGG CAGGTCAGAC GGCCGGGTAG
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| Protein sequence | MTRSVATRRP AMARRAAATA LTLGGAAGLT YGIPSLTTLR RLRLRWTPAL AGLGAPDHVA
LTFDDGPDPV STPQFLDVLA ELDVRATFFV LGGLLERAPT LAREMAAAGH ELAVHGWDHR
PMLLRGPRST HDHLARTRDL VVEITGRAPR FVRPPHGILS AGLLVAARRL DLSPVLWSAW
GRDWTAEATP GSVLGTLAPD LCGGATVLLH DCDCTSAPGA WRSALGALPG IAARCDDAGL
RLGPLAEHGL PAWSNPPSGR SGRAGQTAG
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