Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1018 |
Symbol | |
ID | 3906260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 1212862 |
End bp | 1214025 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637878351 |
Product | ISRSO5-transposase protein |
Protein accession | YP_480130 |
Protein GI | 86739730 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3415] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCTTGGG GGCGTGGCTG GCCCGGTAGG ACCGGGAGGG TGTCCCGCCG TGCCACCGCG ATCACCCTGA CCTGCGACGT CCGTGCCGTT CTGGCGGGCC GTGCCCGTTC GTTGACGGTG CCGCGCCGTG ACTGGCTGCG CGCGGCGATC GTGCTCGCCG CCGCCGACGG TGCGAGCAAC ACGACGATCG CCACCGATCT CGGTGTCTGC GAGGACACCG TGGGCAAGTG GCGGGGCCGG TTCGCCCGTG AAGGGCTCGC CGGGCTGGTG GACCGGCCCC GTTCGGGTCG GCCGGCCCGG TTCACCGCGG TGCAGGTCGC CGAGGTCAAG GCGTTGGCGT GCACCCGGCC CGCGGACGTC GGTGCGCCGC TGGAACGCTG GTCGAACGCC GAACTCGCCC GCCACGCGGC CCGGGAGGGC ATCGTGGCGG GCGTGTCAGC GTCGTCGGTC GGACGCTGGC TGGCCCGGGA TGCGATCCGC CCCTGGCAGC ACCGCTCGTG GATCTTCCCC AGGGATCCGG CGTTCGTCGC GAAGGCCTCC CGGGTCCTCG ATCTCTACGC TCGGATCTGG GACGGTGCAC CACTCGGCGA GAACGACTAT GTGATCTCAG CCGATGAGAA GTCCCAACTG CAGGCACTGC GCCGCTGCCA CCCGACCGCG CCCGCCCAGG CCCGTCACGG ACCGCGCGTC GAGTTCGAGT ACCAACGCGG CGGCACCCTG GCCTACTTCG CCGCCTACGA CGTCCACCAT GCCCACGTCA TCGGCCGGAT CGAGCCGACC ACCGGCATCG CCCCGTTTCA CCGGCTCGTC GACCAGGTCA TGACGGCCGA GCCCTACGCC TCGGCACGCA GGGTGTTCTG GGTCGTCGAC AACGGCTCCT CCCACAACGG CCAGACCTCG ATCCGCCGGA TGAGCGCGGC CCATCCGACC GCGACGCTCG TCCACCTCCC GGTCCACGCC TCCTGGTTGA ACCAGGTGGA GATCTACTTC TCGATCCTGC AGCGCAAGGC CATCGAACGC GGGGACTTCG CCGACCTCGA CGCACTCGGC GACCGGGTCA TGGGCTTCCA GGACCTCTAC AACCAGACCG CGGCCCCGTT CGACTGGAAG TACACCCGCG CCGATCTCCT CAAGACCGCC AGCGGCCTCG CCCTCGCCGC ATAA
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Protein sequence | MPWGRGWPGR TGRVSRRATA ITLTCDVRAV LAGRARSLTV PRRDWLRAAI VLAAADGASN TTIATDLGVC EDTVGKWRGR FAREGLAGLV DRPRSGRPAR FTAVQVAEVK ALACTRPADV GAPLERWSNA ELARHAAREG IVAGVSASSV GRWLARDAIR PWQHRSWIFP RDPAFVAKAS RVLDLYARIW DGAPLGENDY VISADEKSQL QALRRCHPTA PAQARHGPRV EFEYQRGGTL AYFAAYDVHH AHVIGRIEPT TGIAPFHRLV DQVMTAEPYA SARRVFWVVD NGSSHNGQTS IRRMSAAHPT ATLVHLPVHA SWLNQVEIYF SILQRKAIER GDFADLDALG DRVMGFQDLY NQTAAPFDWK YTRADLLKTA SGLALAA
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