Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1016 |
Symbol | |
ID | 3906258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 1210973 |
End bp | 1212196 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637878349 |
Product | transposase IS116/IS110/IS902 |
Protein accession | YP_480128 |
Protein GI | 86739728 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGTTCG TCGGTGACGA CTGGGCGCAG GACCACCACG ATGTGGAGGT GCAGGACGAG ACGGGTCGGC GACTGGCGAA GGGCCGGCTG CCGGAGGGCG TGGCCGGGAT CGCCCGGCTG CACGCGCTGA TCGGGCGGCA CCTGGCCGAG GACGCCGGCC CGGAGCAGGT CGTGGTCGGG ATCGAGACCG ACCGCGGCCC GTGGGTGCGG GCGCTCGTCG CGGCGGGCTA CCAGGTGATC GCGGTGAACC CGTTGCAGGC GGCGCGGTAC CGGGAGCGGT ACTCGACGTC GGGTGCCAAG AGCGACGCCG GCGACGCGCA CAGCCTGGCG GACATGGTCC GTACGGACCG TCACCAGCTG CGGCCGGTCG CTGGGGACAG TGACACCGCC GAGGCGGTGA AGATCGTGGC GCGGGCGCAT CAGAACCTGA TCTGGGACCG GACCCGCCAG ACCCAGCGGC TGCGCTCGGC GCTCCTGGAG TTCTTCCCGG CCGCGCTGGC CGCGTTCGAC GACCTCGATA CCCCTGACGC GCTGGAGCTT CTCGCGAAGG CGCCGTCGCC GGCCGAGGCC GCGAGGCTGA CCGTTGCGCA GATCAGCGCC GCGCTCAGGC ACGCCCGCCG GCGGAAGATC CCCGAGAGGG CGGCCGCGAT CCGGGCGGCG CTGCGGGCCG AGCAGCTGCC CGTCACGCCG GCGGCGACCA CCGCCTACGC CGCGGTCGTG CGCGCCCAGG CCGGGCTGCT CGCAGCCCTC AACGGCGAGA TCGCCCGGCT CGAGGAGCAG GTCGCGGACC ATTTTGACCA GCACCCGGAC GCGAAGATCC TGCTGTCCCA GCCCGGCCTG GGACCGGTCC TCGCGGCCCG GGTGCTCGCC GAGTTCGGTG ACGACCCGAC GCGCTACGCC GACGCGAAGG CACGGAAGAA CTACGCCGGC ACGAGCCCGA TCACCCGCGC CTCCGGGAAG AAGAAGACGG TCCTGGCCCG CTACGCACGC AACAACCGGC TCGCCGACGC GCTACATCAG CAGGCGCTCT CGGCCCTGAG CGCATCCCCG GGCGCCCGGT CGTACTACGA CGCGATCCGC GCGCGCGGCA CGTCGCACCA CGCCGCGCTG CGCCAGCTCG GCAACCGGCT CGTCGGAATC CTGCACGGCT GCCTCAAGAC CCACACCCCC TACAGTGAGG CAACCGCATG GACACAGAAA GCAACACTCG ACGTCGCCGC TTGA
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Protein sequence | MLFVGDDWAQ DHHDVEVQDE TGRRLAKGRL PEGVAGIARL HALIGRHLAE DAGPEQVVVG IETDRGPWVR ALVAAGYQVI AVNPLQAARY RERYSTSGAK SDAGDAHSLA DMVRTDRHQL RPVAGDSDTA EAVKIVARAH QNLIWDRTRQ TQRLRSALLE FFPAALAAFD DLDTPDALEL LAKAPSPAEA ARLTVAQISA ALRHARRRKI PERAAAIRAA LRAEQLPVTP AATTAYAAVV RAQAGLLAAL NGEIARLEEQ VADHFDQHPD AKILLSQPGL GPVLAARVLA EFGDDPTRYA DAKARKNYAG TSPITRASGK KKTVLARYAR NNRLADALHQ QALSALSASP GARSYYDAIR ARGTSHHAAL RQLGNRLVGI LHGCLKTHTP YSEATAWTQK ATLDVAA
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