Gene Francci3_1005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1005 
Symbol 
ID3906692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1198731 
End bp1199582 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content71% 
IMG OID637878338 
Producthypothetical protein 
Protein accessionYP_480117 
Protein GI86739717 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGA CGGCCGGGGC TGAGGATCTC ACGGCCCTCG CCCGGCGACT CGCGCCCGAG 
GTCGTCGAGG AGGCCGTTCG AGAGGCCCGC GAACTCGCCC GACATCAGAT CGTCGAGTGC
CTCGCCCGTG AGATCACCCG GGTGGCGATG GAGGGCATCA GGCCGGCCGT GACCCCGCCT
CGGGACCTTC CTCCCGTTCC GGTCTCGCAG TCGGGGTCGG TTCCGGAGTC GGAGTCCGTC
TCGGAGTCCG TCTCGGAGTC CGTTCCGGAG TCCGTTCCGG AGTCGACTGT CGCAACTGTG
GGCGTGGTCG GGCCTGGCAT CCGGCCGTCC TCGCGCGTGT CCCGGACCGA CCGCGGTCTT
TACGTATACG GCATCATCCC CGCGGCGAGC GACACCGCCG GAATCGATGG GCTGGGCGCC
GACACCGAGG TGGACGCGAT CGCGCGGGAT GACGCCCGTC GGCACACCGG TCGGCCGGGG
CGGATGTTCG ACTGCGCGTA CCTCGTGCCG CGTTCGGAGG AGGATGCGTT CCTCACCACG
GCGACCGCGC TGACGCGGGA GCTGGACGCG GCGGGGTGCC CCGCCGAGGC GACGGGTCCC
TGGCCGCCCT ACTCGTTTGT CCATATCACG CTGGGTGGTT ACCAGCATCT GGGCGGCACC
TTCGACGGTC ACGAGGACTC GCCCGGCGGT GGAGCGCCGG TGGTTGACCG GGTGCGCACC
ACTGACCGGG TGCGCACCGC CGATCGGGTT CCGGACGCCG ATCGGGTCCC GGGTCCTGTC
GGAGGACGGC ATGGTGCTGT CGGAGGACGG CATGGTGCTG TCGGAGGACG GCATGGTGGC
GGCGATGACT GA
 
Protein sequence
MSTTAGAEDL TALARRLAPE VVEEAVREAR ELARHQIVEC LAREITRVAM EGIRPAVTPP 
RDLPPVPVSQ SGSVPESESV SESVSESVPE SVPESTVATV GVVGPGIRPS SRVSRTDRGL
YVYGIIPAAS DTAGIDGLGA DTEVDAIARD DARRHTGRPG RMFDCAYLVP RSEEDAFLTT
ATALTRELDA AGCPAEATGP WPPYSFVHIT LGGYQHLGGT FDGHEDSPGG GAPVVDRVRT
TDRVRTADRV PDADRVPGPV GGRHGAVGGR HGAVGGRHGG GDD