Gene Francci3_1001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1001 
Symbol 
ID3906687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1193070 
End bp1193825 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content65% 
IMG OID637878334 
Productreverse transcriptase 
Protein accessionYP_480113 
Protein GI86739713 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACAGGTT ATGCGCAGCG CTCAAGCCCC GATCGGGTCC TCACCAGGCC CGACAGGCCA 
GCACTGCGCA TAATCCAGCG CTGCTCATTA GGCTCTCCGA TCTCACCCGT GCTGGCGAAC
CTGTTCATGC ACTACGCGTT CGACGCGTGG CTGGCCCGGA CCTACCCGGG CGTCGCGTTC
GAGCGCTACG CCGACGACGC GATCGTGCAC TGCGACAGCA GGAGTCGGGC TCGCCACGTG
CTGGCCGCGC TCGACGACAG GATGGGACAG GTCGGACTGC GACCGCACCC GACCAAGACC
AGGATCGTGT ACTGCAAGGA CAGCAACCGG CGCGGCTCCC ATGAGCACAC GTCGTTCACG
TTCCTCGGCT ACACCTTCCG CGCCCGCAAG GCACGCAGCA GGCACGGGAA GTTCTTCACG
AACTTCCTGC CCGCGATCAG CAAGGAAGCC CAGAAGAAGG TCAGCGGGCA GGTCCGCCGA
TGGCGGCTAC ACCTGCGGAC CGGCCACACC CTCGACGAGC TGGCACGAAA GATCAACCCG
ATCGTGCGCG GCTGGGCGCA GTACTACGGG GCGTTCTACC GCTCCGCGCT GCTTCCCCTC
CTACAGCGCA TCAACGCCTA CCTGGTGCGT TGGCTCCGCA AGAAGTACAA ACGGCTGAGA
CCGTTCCATA AGGCCCTGGC CTGCTGGCAA CGCATCACCC GCCAACGCCC CGGGCTCTTC
GCCCACTGGG CATGGACGTC CAACGCCTGG CGATGA
 
Protein sequence
MTGYAQRSSP DRVLTRPDRP ALRIIQRCSL GSPISPVLAN LFMHYAFDAW LARTYPGVAF 
ERYADDAIVH CDSRSRARHV LAALDDRMGQ VGLRPHPTKT RIVYCKDSNR RGSHEHTSFT
FLGYTFRARK ARSRHGKFFT NFLPAISKEA QKKVSGQVRR WRLHLRTGHT LDELARKINP
IVRGWAQYYG AFYRSALLPL LQRINAYLVR WLRKKYKRLR PFHKALACWQ RITRQRPGLF
AHWAWTSNAW R