Gene Francci3_0985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0985 
Symbol 
ID3905841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1163651 
End bp1164454 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content58% 
IMG OID637878319 
ProductArsR family transcriptional regulator 
Protein accessionYP_480098 
Protein GI86739698 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.326764 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAT ATTCCAAAAT TTTCGCGGCT CTTGCAGACG CGACCCGTCG TAACATGGTC 
GAGCGACTTG TCGAAAATGA CGCCACAGTC GGTGAGCTCG CCAAGCCGTA TGGGATAAGC
CTCCAGGCGG TCTCCAGGCA CCTCAAGGTG CTTCAGGAAG CCGGCTTGAT CCGCCGCCCT
GGAGGTGGCC ACCGCAGCCC GGTACGTCTC GAAGAGGATG CGCTCGGCCC AGCGGCCCAG
TGGATCGAGG AATTTTACAA CTCTCGCCTC AGATCCAAGA ACAACGATAT CACCGGAGAG
ATCATAAGGA CAGCTAACCC GGCCCCGGGA GAATTCGTAG TTGTCCGAGA ATTCCCGTTC
CCCCTAAGGC AGCTGCACCG TATCCGAACG GATCCTGAGC TGTACGTGCA ATGGATTTCG
CCGCCTGAGA CGCAGGTCAG GATCATGTTC TGGGACCCCA GACCTGGTGG ACGTTGGCGC
CTCCGTTTCA TCGGGGACTC GAAGGTCGAT ATCTACGGCA CCTTCCACGA GTACGACCCT
GGCTGGATCG TGCAAATGTT TACAATTGGC AATAAAACCG ACAATCTCGC AATCTCGAGC
CAGCGGGCCA AGGATGTCGG CGGCGACGAA AGCAGGATGT CCTTCAAAGT GACGACCGAC
AATCTCGAGG TCTGGGCGGA CTTCAGACGC CGCTGCTACC CCGAGACCGA AACCAACGCT
TCCGATATCC ACGGGGAGGT GGAGGCCGAG ATCAAGGAAG CCTTCGGCAG AGCTGCAAGC
CTGCCCGAAA GCGATGCAGC GTAA
 
Protein sequence
MTEYSKIFAA LADATRRNMV ERLVENDATV GELAKPYGIS LQAVSRHLKV LQEAGLIRRP 
GGGHRSPVRL EEDALGPAAQ WIEEFYNSRL RSKNNDITGE IIRTANPAPG EFVVVREFPF
PLRQLHRIRT DPELYVQWIS PPETQVRIMF WDPRPGGRWR LRFIGDSKVD IYGTFHEYDP
GWIVQMFTIG NKTDNLAISS QRAKDVGGDE SRMSFKVTTD NLEVWADFRR RCYPETETNA
SDIHGEVEAE IKEAFGRAAS LPESDAA