Gene Francci3_0971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0971 
Symbol 
ID3903878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1149113 
End bp1149664 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content76% 
IMG OID637878305 
ProductFHA domain-containing protein 
Protein accessionYP_480084 
Protein GI86739684 
COG category[T] Signal transduction mechanisms 
COG ID[COG3456] Uncharacterized conserved protein, contains FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACCCGA CAGGGCTGCG GATCACCGTC CCGTCCGGCC AGAGCGTGCT GTCCGCCGAC 
CGCAGTCACG TCGTCGGCCG GGGCCGTGAC TGCGATGTCG TCATCGCGGA CGGCCGGGTG
TCTCGGCGTC ACGTCCTGCT GGAGCCCCGC GGCGATGCCG GGTGGCTCGC CCGGGACGTC
AGTTCCAACG GCATCTGGGT GGACGGCGCC CGGACCGGCA GCATCGCCCT GAACGACGGC
GAGGTGCAGG TGCACCTCGG CGCGGCGAAC GGGCCGACGG TCGTCCTGGC CCCGGTCAGT
CCCACGCCGC GGCGCCCGCC CGCCGCGCCC GACGACCCGG ACGTCGGGAA TCTGGCGACC
ATGCTGGCCG GCCAGGGCGG CCAGGGCCGC ATCGATCCCA GCCCCGTCCC GGCGGGGGCG
GACTCCGCCC AGGTTCCGGC CCAGCGTCAC GCCGGCCACT CGCCCGTGGC GAGCTGGCTG
CGCGCTCTGC CCACCCTCGT GTGGCTCGCC GCGGTCGGCT TCACCCTCGG CGCGTTGCTC
GCGCTGTCCT GA
 
Protein sequence
MDPTGLRITV PSGQSVLSAD RSHVVGRGRD CDVVIADGRV SRRHVLLEPR GDAGWLARDV 
SSNGIWVDGA RTGSIALNDG EVQVHLGAAN GPTVVLAPVS PTPRRPPAAP DDPDVGNLAT
MLAGQGGQGR IDPSPVPAGA DSAQVPAQRH AGHSPVASWL RALPTLVWLA AVGFTLGALL
ALS