Gene Francci3_0949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0949 
Symbol 
ID3902919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1120616 
End bp1121656 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content72% 
IMG OID637878283 
Producthypothetical protein 
Protein accessionYP_480062 
Protein GI86739662 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.102443 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACCA AAGCAGCACG GTCCGCGCTG GTTCCCCTGA CTCCCGACCT GGCTCGGGAG 
GTGGTCGCCG CATCCGCCGC GGCGCCGTCC ATCCATAACA CGCAGCCGTG GCGCTGGCGC
CTGGAGGCAG GCCGGCTCAC CCTTCTCGCC GACAGCACCC GCCAGCTCAA GGTCGCCGAT
CCCGAGGGCC GGCAGATGCT GTTGAGCTGC GGAGCGGCGC TGTTCAACGC CCGGCTGGCG
CTGCGGGCCC GCGGCGAGGT CCCCGTGGTG GAGCCGCTAC CCGACGGCGT TGACGACTTC
CGCTCCGCTC CGCTCGCCAC CATCTCGGTG ATCGGCCATC AGCCTGCCGA GGACGACGAG
CGGGCGTTGG CCGATGCCAT CCCGCGGCGG CACACCGATC GCCGGCCGTT CGACGACCAG
CCGTTGCCGA CCGAGGTAAT CAGCCGCCTG CGTGCCGCGG CCGAGGCGGA GGGCTGCTGG
CTTACCGCGC CGATCGACCC GGAGCTGCGC GTCCAGGTCA GCGTCCTGCT GTCCCGGGCG
GACTGGATCG AGGCGCACAA CGCGGCCTAC CGGGAGGAAC TGGCCTCGTG GAGTCGAACG
GGGTCCACGT CGGCCGACGG CATCCCGCGC AGCGCAGTCG TCCACACCGA CGCCCCGCGC
CAGTCCGAGT TTCCGATGCG GGACCTCGAC GTGGTCGGCG AGGCGGGGAC CGTGCTGGAC
GAGACGGATG TGGAACGGCC CGGCATCCTG ATCATCGGCA CCGATACGGA CACGACCGCC
GACCGGCTGC GCGCCGGGCA GGCGATGCAA CGTGTGCTGC TCACCGCCAC CTTGCTCGGT
CTCGCCTCGT CGCCGATGTC GCAGGCGATC GACGTCGAGG GCATGCGGGA GCAGTTCCGC
GGCACCACCA GCGGTCTCGG GCACGTCCAG ATGATCCTGC GGGCCGGCTA TCCCGAGCCG
GGTGCGCAAC CGCTCGGCCC CACTCCCCGC CGGGACGTTG ACGAGGTCCT GGAGGTCGTC
GGGTCGAATG ATCGGGCGTA G
 
Protein sequence
MSTKAARSAL VPLTPDLARE VVAASAAAPS IHNTQPWRWR LEAGRLTLLA DSTRQLKVAD 
PEGRQMLLSC GAALFNARLA LRARGEVPVV EPLPDGVDDF RSAPLATISV IGHQPAEDDE
RALADAIPRR HTDRRPFDDQ PLPTEVISRL RAAAEAEGCW LTAPIDPELR VQVSVLLSRA
DWIEAHNAAY REELASWSRT GSTSADGIPR SAVVHTDAPR QSEFPMRDLD VVGEAGTVLD
ETDVERPGIL IIGTDTDTTA DRLRAGQAMQ RVLLTATLLG LASSPMSQAI DVEGMREQFR
GTTSGLGHVQ MILRAGYPEP GAQPLGPTPR RDVDEVLEVV GSNDRA