| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0948 |
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| Symbol | |
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| ID | 3902918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 1117769 |
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| End bp | 1119973 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637878282 |
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| Product | serine/threonine protein kinase |
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| Protein accession | YP_480061 |
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| Protein GI | 86739661 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0515] Serine/threonine protein kinase
[COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.21638 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTCAT CGGATGCGGG TGTGGCGGCA CGATCCGCCC CCCTTGGCCC GGACGACCCC
CACGAGCTCG GCTCGTACAC GCTGCTGGGC AAACTCGGCC AGGGTGGAAT GGGCATGGTC
TATCTGGGCC GCTCCGGGAA GGGCCGGCTC GTCGCCATCA AGGTGATCCG GAACGAGGCC
GTCGGAAACC CCGAGTTCCG AGCCCGGTTC CGGCTGGAGG CCGAGACCGC CCGGCGAGTC
GCCCGGGTCT GCACCGCCGA GGTGCTCGAC GCCGATCCGG ACGCCGAGTG GCCCTACCTG
GTCACCGAGT TCATCGAGGG CGAGACCCTC GCCCGGTACG TCCAGCGCAA CGGCCCGCTC
GCCGATGCCA ACCTCGAACA ACTCGCGGTC GGCGTGGCCG CGGCGCTCAC CGCCATCCAC
AGCGCCGGGA TCGTGCACCG CGACCTCAAG CCCGCGAACG TCATCCTCTC ACCGTTCGGC
CCTCGGGTGA TCGACTTCGG TATCGCCCGG GCAGTGGACG CCGGCAGCAA CCTCACCGGC
GATCTCCAGC AGCTCGGGAC GCCGGCGTTC ATGTCCCCGG AGCAGATCGA GAGCCGGCCG
ATCACCTCGG CGGTCGACAT CTGGGCATGG GGTGGCCTCG TCGCCTTCGC CGCCACCGGG
CACTACCCCT TCGGTGAGGC CTCGGCGCAG GTGCTGCTCT ACCGCGCCCT ACACGAGGAA
CCGCAACTCG ACGACGTCGA CCCGGCGCTG CGCCCGATCG TCTGGCACGC GATGCGCAAG
GACCCGAGTA CCCGCCCGAG CGCCCAGCAG CTCATGCTGC GCCTGCTCGG CGACCCGTCG
GGCACCGGCC CGGACGCCGC CGCCGCCGTC AACCCGCAGG ACGTCACGAA CGTCCTGCAG
GGCTGGAAGC TGCCGGTGCC CGGCCCAGGC GCCCCGGCCA CAGGCACCCC TGCCACAGGC
AGCACCGGGC CCCACGGGGC CGGATTCCCC GCGCCGGCAG CGGCCCCCGT CAGCAGCGGT
TACACCGTCG ACCAGGACGC CCCGACCCGG CTACCCGCCA GCGCCGGGGG TCCCGGGGGT
CCCGGGGGCG GTGGAGCCGA TGGCCCCGGC CGGCAGGGCG GCACGGGCAG GAGCAGGAAC
CGCACCCCGC TGCTCGTCGG TGGAGGTGTC GTGGTCGTCG GCGCGATCCT CGCGGGAGTA
TTCGCCCTCA GCGCGGGTGG TGACGGCGGC TCCGGGACCG ACGCGGCCAA TCCGGCCACC
GTCTCCGGGG CTCCGGCCAC ATCGACCCAA TCGGCCCAAT CGGCGGCCTT CACGCTGCCC
AGGGCGGCCC AGCCGCTTGG CAAGGACACC CTCGTCTACG CGTCCAACCG CAACGGCAAC
TACGACCTGT TCACCGGGCA GGTCACGGAC AACGGGCCGC TCGCGAACGA CAAGCCGATC
GTCACCGGTC CGGACCAGGA GATGCTGCCC GCGATCAGCA GCGATCGCAA GACGATCGTC
TACTTCAAGA AGGGCAGCCC GAATACGCTG CAGGCGATCG CCGCCGATGG CTCCGGGAAA
CCGGTACAGC TGTTCACCTT GGGCCCGGCC GCCAAGCTGA CGATCGCGGA CGACGCCCGG
CCCTCGCTCT CCCCCGACGG CGGCTTCCTG GTCATCCGTT CCACCACGGA TCAGACCGGA
ACGCTGAACC CCGGCCTGTA TGTGGTGAAA CTGGACGGCT CGAGCGTGCG ACGGCTCAAC
GCGAAGCCAC AGGCGACCGA CCCCGCCTGG TCGCCGGATG GCGAGCGGAT CGCCTACTGG
TCGAACAGTA CCGGTGGCAA CCGCGGCTTC ATCGTGGTGA TCCCGACCCA ACCGGATGCC
CAGCCGACCC CGATCACGCA GGATCAGGGT AACGGGGACT CGGACCCGGT CTGGTCCCCG
GACAGCAGAA AGATCGCTTT CACCCGAGCG AAGAACGGCG ATCTGGAGAT CTTCGAGATG
AACTCGGACG GCACCGACGC CCGGCAGCTC ACCCGGGTGC GCGGGGACGA CCAGGACCCG
GCCTACGCGC CGGACGGTCG CATCGCCTTC AGCGGGCAGC GCAATCCCAC GAACCCCGAT
GACCGGCAGC TCTACGTTCT GAATCCGGAC GATCTGAACG ATGGTGACCG CAAGCTCACC
ACTACCGGCG GGTTCAACGG CCACGCCCGT TGGAACGCCG GCTGA
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| Protein sequence | MMSSDAGVAA RSAPLGPDDP HELGSYTLLG KLGQGGMGMV YLGRSGKGRL VAIKVIRNEA
VGNPEFRARF RLEAETARRV ARVCTAEVLD ADPDAEWPYL VTEFIEGETL ARYVQRNGPL
ADANLEQLAV GVAAALTAIH SAGIVHRDLK PANVILSPFG PRVIDFGIAR AVDAGSNLTG
DLQQLGTPAF MSPEQIESRP ITSAVDIWAW GGLVAFAATG HYPFGEASAQ VLLYRALHEE
PQLDDVDPAL RPIVWHAMRK DPSTRPSAQQ LMLRLLGDPS GTGPDAAAAV NPQDVTNVLQ
GWKLPVPGPG APATGTPATG STGPHGAGFP APAAAPVSSG YTVDQDAPTR LPASAGGPGG
PGGGGADGPG RQGGTGRSRN RTPLLVGGGV VVVGAILAGV FALSAGGDGG SGTDAANPAT
VSGAPATSTQ SAQSAAFTLP RAAQPLGKDT LVYASNRNGN YDLFTGQVTD NGPLANDKPI
VTGPDQEMLP AISSDRKTIV YFKKGSPNTL QAIAADGSGK PVQLFTLGPA AKLTIADDAR
PSLSPDGGFL VIRSTTDQTG TLNPGLYVVK LDGSSVRRLN AKPQATDPAW SPDGERIAYW
SNSTGGNRGF IVVIPTQPDA QPTPITQDQG NGDSDPVWSP DSRKIAFTRA KNGDLEIFEM
NSDGTDARQL TRVRGDDQDP AYAPDGRIAF SGQRNPTNPD DRQLYVLNPD DLNDGDRKLT
TTGGFNGHAR WNAG
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