| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0944 |
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| Symbol | |
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| ID | 3902914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1111448 |
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| End bp | 1112254 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 637878278 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_480057 |
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| Protein GI | 86739657 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0441553 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.118759 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCG GACCGTGCGA GCCGGCTCCG GGTCACCCCG GCGGGCCGGG CGGTGGCGTC
GACCGTGATC GTGACCATGC CGGGGACCGT GCTGGGGACC CGGAGTTCGC CCCGGCGACC
CGCGGCCTCG TCGTCGTGGG ACCGGGGGCG AGCTTCGGTT CCGACCTGTT GCGCCGGTTC
GGCCGGGAGG GGTTCGCCCT GGGGGTCGTC TCCCGGTCTG CCGACACGCT GACCCGGGTG
AGGGACGAGC TCGCCGAGGA CGGCCTGGCG GTGCACGGCG CCGTCGCCGA CGTCACCGAC
CAGCCGGCCC TCACCACGGC CATCCAGCGG GTGGCGGCCG ACGTCGGGGG GCTGACGGTG
CTCGTCTACA ACGCCAAGCT CAGCATCCGC GGCGGCGCCC TCACGGTGAA GGCCGAGACG
ATGAACCAGA CCCTTGCGGT GAACGTCACG GGCGCGCTCA CCGCGGTGCA GGTGGCGGCA
GACCTCCTCG TGGACCGGCC GGCCGCGACC ATCCTGTTGA CCACGGCCGG ATCGCGCACC
GAGCCGGTGG CCGGCCGGTT CGCGCTGGCG ATCGGCAAGG CAGGCCTCGC CGCCCTCGCC
GATGCGGTAC GGCCGATGCT GGCCGCGCGG GGTGTCCGGC TGCGCACGGT GGTTCTCGAC
GGCAGGGTGG ACGCCGCGGG CCCGCTACGT CCGGGGGTGG TCGCGGACCA CTTCTGGCAG
GCGTTCGCCG CCCCGCGGGG CGACGTTTTC CGGCTCGCAC CGGCCAGACG GGCCACTCCG
GTGGCGCAGC TCCCGCTGGA GGTGTGA
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| Protein sequence | MSTGPCEPAP GHPGGPGGGV DRDRDHAGDR AGDPEFAPAT RGLVVVGPGA SFGSDLLRRF
GREGFALGVV SRSADTLTRV RDELAEDGLA VHGAVADVTD QPALTTAIQR VAADVGGLTV
LVYNAKLSIR GGALTVKAET MNQTLAVNVT GALTAVQVAA DLLVDRPAAT ILLTTAGSRT
EPVAGRFALA IGKAGLAALA DAVRPMLAAR GVRLRTVVLD GRVDAAGPLR PGVVADHFWQ
AFAAPRGDVF RLAPARRATP VAQLPLEV
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