| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0941 |
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| Symbol | |
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| ID | 3902911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 1107016 |
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| End bp | 1108683 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 637878275 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_480054 |
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| Protein GI | 86739654 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0194279 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.405788 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGTTC TGACGCTCCC GCCGACCACG GCGACCTCGT TGAACGCCGG GCGGCGGGAA
CGGGAGCTGG CCGCCGTCGC GGCTGGCGGC CCGGTGGACC TGCTGGTGAT CGGCGGTGGG
GTCACCGGGG CTGGGGTGGC CCTGGACGCC GCCTCCCGCG GCCTGTCCGT CGTCCTCGCC
GAGGCGCACG ATCTCGCCTT CGGCACGAGC CGATGGAGTT CCAAGCTCGT TCACGGCGGG
CTGCGTTACC TGGCCACCGG AGATGTGGCG CTGGCGCGGG AGAGCGCCGT CGAGCGCGAC
ATCCTGATGC GGCACACCGC GCCCCATCTC GTGCGGGCGC TGCCCATGCT CACCCCGCTG
ACCCCGGGAG TACCGCGGTC GAACGCCGCG CTGGTCCAGG CCGGGGTGTG GCTCGGCGAC
CTGCTGCGCC GCGGCGCGGG CACGCCCCGC GCGGTCCTGC CCGGCCCACG CCGGCTGACC
GCCGTGGAGA CGCTCGGGGT GGCTCCCGCG CTCCGGGAAG CCGGACTGCG CGGCGGGGTG
CTGCACTGGG ACGGCCGGCT CGTCGACGAC GCCCGTCTCG TAGTCGCGCT GGCCCGGACC
GCAGCCGGAT TCGGCGCCCG GATCCTGACC CGGCTGCGGG TGACCGGCCT CGACGGCGGC
GGCCTCGACG GCGGACCCCG CGGCCCGAGC CGGCACGGTT GTCGTGGGAT CGAGGCGACC
GCGGTGGACA CCCTCACCGG TACCCGGATC ACCCTGCGTG CGCGGACGGT GGTCAACGCC
ACCGGCGTGT GGGCGCCGGC CCTGGCTCCG GGGATCCGGC TGCGGCCGAG CCGCGGCACC
CACCTCGTGC TGCGCTCCAC CGTCCTGGCC GGGACCCGCG CGGCGCTGTC CCTGCCGATG
CCGGGTGAAC GGAACCGGTT CGCGCTGGTG CTGCCCCAGG ACGACGGCCG CGTCTACGTC
GGGTTGACCG ACGTGCCGGT CGAGGAGGTC GTCGACGTCC CGGTGCCCGA CGAGGACGAG
ATCGCGCAGC TGCTGGGCAT CGTCTCGAAC GTGCTGGCCA CCCCCATCGA CCCGGCGGAC
CGGCTGGGCG CCTTCGCCGG CCTGCGCCCA CTGCTCGACA CCGGCACCGA CCACACCGGC
ACCGACCACA CCGTCGTTCC CCACAGCGCC GCCACCCGTA CCAGCGCCGC CCGCACCGCC
GATCTCTCCC GACGGCACCT GGTGCGGACC GACCCGGGCG GCCTGGTCAC GGTGGTCGGC
GGCAAACTGA CGACCTATCG ACGGATGGCC GCAGACGCGG TGGACGCCGC CGTCGCGGTG
GGCGACCTCG ACGCCGGCCC CTGCCGTACC CGGCGACTCG GCCTGGTCGG TGCGGCACCT
CGATCGGTCC TCGCCACGGT GGCCGCGCCG CGCCGTCTGG TCGAGCGGTA CGGGACGGAG
GCACCGAGGG TGCTGGCCCT GGCCGACGGC GACCCCGACC TGCTGGCACC CGTCGCCGAG
GGGACGCCGG TCACCGGCGC GGAGCTGCTG TTCGCGGTGC GGGACGAAGG CGCGCTCGAC
CCGGCGGACC TGCTGGATCG CCGGACGCGC ATCGGGCTGG CTCCCGCCGA CCGCCGGGCG
GCCCTGGGCC CGGCCCGGCA GCTGTTCGAC CATACGCTGA CGCGCTAA
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| Protein sequence | MTVLTLPPTT ATSLNAGRRE RELAAVAAGG PVDLLVIGGG VTGAGVALDA ASRGLSVVLA
EAHDLAFGTS RWSSKLVHGG LRYLATGDVA LARESAVERD ILMRHTAPHL VRALPMLTPL
TPGVPRSNAA LVQAGVWLGD LLRRGAGTPR AVLPGPRRLT AVETLGVAPA LREAGLRGGV
LHWDGRLVDD ARLVVALART AAGFGARILT RLRVTGLDGG GLDGGPRGPS RHGCRGIEAT
AVDTLTGTRI TLRARTVVNA TGVWAPALAP GIRLRPSRGT HLVLRSTVLA GTRAALSLPM
PGERNRFALV LPQDDGRVYV GLTDVPVEEV VDVPVPDEDE IAQLLGIVSN VLATPIDPAD
RLGAFAGLRP LLDTGTDHTG TDHTVVPHSA ATRTSAARTA DLSRRHLVRT DPGGLVTVVG
GKLTTYRRMA ADAVDAAVAV GDLDAGPCRT RRLGLVGAAP RSVLATVAAP RRLVERYGTE
APRVLALADG DPDLLAPVAE GTPVTGAELL FAVRDEGALD PADLLDRRTR IGLAPADRRA
ALGPARQLFD HTLTR
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