| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0936 |
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| Symbol | |
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| ID | 3906100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 1099680 |
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| End bp | 1100702 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637878270 |
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| Product | 6-phosphogluconate dehydrogenase-like protein |
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| Protein accession | YP_480049 |
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| Protein GI | 86739649 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1023] Predicted 6-phosphogluconate dehydrogenase |
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| TIGRFAM ID | [TIGR00872] 6-phosphogluconate dehydrogenase (decarboxylating) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.104233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATGC AGCTCGGGAT GATCGGACTC GGCCGGATGG GTGCCAACCT GGTGCGCCGG
CTGATCCGCG GTGGTCACGA ATGCGTGGTC TACGACGTCA ACCCCGAGGC CGTTAAGGCC
CTGGCTGCGG AGGGCGCCAC GGAGACACGG AGCCTCGCCG AGTTCGCCGC GGCCCTGCGT
CCACCCCGGG CTGCCTGGAT CATGGTGCCC GCCGGGCTGA CCGGTGAGAC CGTCTCGGCC
CTGGCCGAGC ACTTCGCGCC GGACGACGTG ATCATCGACG GCGGCAACTC CTACTACCGG
GATGACATCC TGCGTGCCGC GTCGCTCGTC GAGCGGGGCA TCCACTACGT CGACGTCGGC
ACCTCCGGGG GCGTGTTCGG GCTGGAACGC GGCTTCTGTC TGATGATCGG CGGCGAACCG
GGGGTCGTGG CCCGCCTGGA GCCGCTGTTC GAGACGATCG CACCCGGCGT CGGCACCATC
CCGCGGACCC CGGGCCGGAC CGGCGAGATC ACCCAGGCCG AGAAGGGATA CCTGTACTGC
GGCCCGAACG GCGCCGGTCA CTTCGTCAAG ATGGTGCACA ACGGCATCGA GTACGGCATG
ATGGCCGCCT TCGCCGAGGG GTTCGCGGTG CTCGACAAGG CGAACATCGG CACGACGTCC
GCCGAGCACA ACGCCGAGAC CGCCCCGCTG GGCAACCCGG AGTACTACCA GTACGACCTC
GACACCACCG CGATCGCCGA GGTGTGGCGG CGGGGCAGCG TGGTCAGTTC CTGGCTGCTC
GACCTCACCG CCGCCGCGCT GCAGGAGGAT CCCGGACTCA CCGAGTTCAG CGGCCGGGTG
TCCGACTCCG GGGAAGGACG TTGGACGGTA CTGGCCGCCG TGGAGGAGGG CGTTCCCGCC
CATGTGCTGA CGGCGTCCCT CTACGAGCGG TTCAGTTCGC GCGGGGAGGG CCTGTTCGCC
GACAAGCTGT TGTCGGCGAT GCGCAAGCAG TTCGGTGGGC ACGCGGAGAA GCCGGCCGGC
TGA
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| Protein sequence | MKMQLGMIGL GRMGANLVRR LIRGGHECVV YDVNPEAVKA LAAEGATETR SLAEFAAALR
PPRAAWIMVP AGLTGETVSA LAEHFAPDDV IIDGGNSYYR DDILRAASLV ERGIHYVDVG
TSGGVFGLER GFCLMIGGEP GVVARLEPLF ETIAPGVGTI PRTPGRTGEI TQAEKGYLYC
GPNGAGHFVK MVHNGIEYGM MAAFAEGFAV LDKANIGTTS AEHNAETAPL GNPEYYQYDL
DTTAIAEVWR RGSVVSSWLL DLTAAALQED PGLTEFSGRV SDSGEGRWTV LAAVEEGVPA
HVLTASLYER FSSRGEGLFA DKLLSAMRKQ FGGHAEKPAG
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