Gene Francci3_0914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0914 
Symbol 
ID3906290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1057524 
End bp1058090 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content69% 
IMG OID637878248 
ProductDoxX 
Protein accessionYP_480027 
Protein GI86739627 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.491535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATCCGA TCACCTACAG CCTTGTCACC CCCATGCAGC CGGCCAGTCG CGCCGTCTCC 
ACAGTGTTGC GCCTCGGCCT CGGCGTGGTC TGGCTGGTCG CCGGGCTGTT GAAGGTCAAC
GACCCGGACG GGATGGTGCG CTCCGTGCGG GCGTTCCGCA TCCTGCCCGA TGCCCTCGTG
CAGCCGATCG CGTACGGCGT CCCGTTCCTG GAGATCGCCT TGGGGATGCT GCTCGTCGTG
GGGCTCGCCG TGCGGCTGTC CGCCGTCGTG TCCGCGGTGA TGTTCGCCGT CTACATCGCA
GCGATCGCGT CGGCCGCCAC CCGGGGGCTG CGGATCGACT GCGGCTGCTT CTCCTCTGGG
GGTGATCTCA CTGCCGACGC CCCGACGCAC TACACCTCCG AGCTGATCCG CGACAGCCTG
CTGCTCGCCG CCGCCGGGCT GCTGGCCTGG CGGCCGAGCG GCTACCTGGC GGTGGACCGT
CTCCTCGACC AACCAGTGAA CGATCTTTCC GGGAGTACCG CTGATGGCTG CGAAGTCGAA
GAAGGCACCG TTGACGACCG GCGGTAG
 
Protein sequence
MNPITYSLVT PMQPASRAVS TVLRLGLGVV WLVAGLLKVN DPDGMVRSVR AFRILPDALV 
QPIAYGVPFL EIALGMLLVV GLAVRLSAVV SAVMFAVYIA AIASAATRGL RIDCGCFSSG
GDLTADAPTH YTSELIRDSL LLAAAGLLAW RPSGYLAVDR LLDQPVNDLS GSTADGCEVE
EGTVDDRR