Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0914 |
Symbol | |
ID | 3906290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 1057524 |
End bp | 1058090 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637878248 |
Product | DoxX |
Protein accession | YP_480027 |
Protein GI | 86739627 |
COG category | [S] Function unknown |
COG ID | [COG2259] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.491535 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAATCCGA TCACCTACAG CCTTGTCACC CCCATGCAGC CGGCCAGTCG CGCCGTCTCC ACAGTGTTGC GCCTCGGCCT CGGCGTGGTC TGGCTGGTCG CCGGGCTGTT GAAGGTCAAC GACCCGGACG GGATGGTGCG CTCCGTGCGG GCGTTCCGCA TCCTGCCCGA TGCCCTCGTG CAGCCGATCG CGTACGGCGT CCCGTTCCTG GAGATCGCCT TGGGGATGCT GCTCGTCGTG GGGCTCGCCG TGCGGCTGTC CGCCGTCGTG TCCGCGGTGA TGTTCGCCGT CTACATCGCA GCGATCGCGT CGGCCGCCAC CCGGGGGCTG CGGATCGACT GCGGCTGCTT CTCCTCTGGG GGTGATCTCA CTGCCGACGC CCCGACGCAC TACACCTCCG AGCTGATCCG CGACAGCCTG CTGCTCGCCG CCGCCGGGCT GCTGGCCTGG CGGCCGAGCG GCTACCTGGC GGTGGACCGT CTCCTCGACC AACCAGTGAA CGATCTTTCC GGGAGTACCG CTGATGGCTG CGAAGTCGAA GAAGGCACCG TTGACGACCG GCGGTAG
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Protein sequence | MNPITYSLVT PMQPASRAVS TVLRLGLGVV WLVAGLLKVN DPDGMVRSVR AFRILPDALV QPIAYGVPFL EIALGMLLVV GLAVRLSAVV SAVMFAVYIA AIASAATRGL RIDCGCFSSG GDLTADAPTH YTSELIRDSL LLAAAGLLAW RPSGYLAVDR LLDQPVNDLS GSTADGCEVE EGTVDDRR
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