Gene Francci3_0871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0871 
Symbol 
ID3903854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1013599 
End bp1014411 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content69% 
IMG OID637878204 
Productbeta-lactamase-like 
Protein accessionYP_479984 
Protein GI86739584 
COG category[R] General function prediction only 
COG ID[COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCGCC CGAACCGGGG CGGACCAGGA ACCCTCCTCC CAGCAGAGCC CGGTGGTGCC 
ACGGTGAAAC TGACGATCCT CGGCTGTTCA GGCACGTATC CCGGCCCGAC GTCGGCCTGT
TCGTCCTACC TCGTCGAGTC GGACGACGGG TTCCGGCTCG TCCTCGACGC GGGCAACGGG
TCCATGGGCG AACTGCAACG GCACTGCGAC CTGCGTGAGA TCGACGCGGT GCTGCTCAGC
CACCTGCACG GCGACCACTG CCTGGACCTG GTGGCCAACT CCTACGCGCG GCGGTACCAC
CCGGAGGGCA TGCCGCCCAA GCTCCCGGTC TACGGCCCGA TCAACACCCA GGAACGGCTG
TGCGGAGCGT TCGAGAAATG GCCGGACGAC AGCCTGGCCG ACATCTACGA CTTCCGGACC
ATCGGCGCCG GCCGCCTGCA CATCGGGCCG TTCCGGATCG ATCTCACCCG GGTGGCCCAT
CCGGTGGAGG CCTATGGCAT CCGCCTCACC GCCGACGATC GGGTACTGAC CTACTCGGGC
GACACCGGGG CGTGTGACCG GCTGGTCCGC CTCGCTACCG ACAGCGATCT CTTCCTCTGC
GAGGCGTCGT TCCTCGATGA GGAGGACAAC CCCCCTGACC TGCATCTGAC CGGCCGGGAG
GCCGGCGAGC ACGCCCGGCG AGCCGGCGTG GGTCAGCTCG TGCTCACGCA TCTTGTCCCG
TGGGGGAACG CCGCCCGTTC CGAGGAGGAG GCGGCTGGCG TCTACGACGG CCCGCTGACC
CTCGCGAGCC CCGGCACCGT CTATGAACTC TGA
 
Protein sequence
MGRPNRGGPG TLLPAEPGGA TVKLTILGCS GTYPGPTSAC SSYLVESDDG FRLVLDAGNG 
SMGELQRHCD LREIDAVLLS HLHGDHCLDL VANSYARRYH PEGMPPKLPV YGPINTQERL
CGAFEKWPDD SLADIYDFRT IGAGRLHIGP FRIDLTRVAH PVEAYGIRLT ADDRVLTYSG
DTGACDRLVR LATDSDLFLC EASFLDEEDN PPDLHLTGRE AGEHARRAGV GQLVLTHLVP
WGNAARSEEE AAGVYDGPLT LASPGTVYEL