Gene Francci3_0869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0869 
Symbol 
ID3903852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1012117 
End bp1012779 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content74% 
IMG OID637878202 
Productputative deoxyribonucleotide triphosphate pyrophosphatase 
Protein accessionYP_479982 
Protein GI86739582 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0127] Xanthosine triphosphate pyrophosphatase 
TIGRFAM ID[TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCG AACACCACGG ATCGGCCCGG ACGACGAAGG TGGTCCTCGC CAGTCGCAAC 
GAGGCGAAGC TCGCGGAGCT GCGCCGCATC CTGGCGGCCA GCGGCCTGGC CGTGGAGCTG
GTGGGCCTGC CGCCAGGCGA GGAGGTGCCC GAGACCGGGA CGACCTTCGC CGAGAACGCT
CTGATCAAGG CGCGGGCGGC GGTCGCGGAG ACCGGGCTGC CCGCGGTCGC CGACGACTCC
GGGCTCGCCG TCGACGAGCT GGCCGGGATG CCGGGGGTGC GCTCGGCTCG ATGGTCGGGC
TGGCGCGACG GCACCCGGGT CGAACGGGAC ACCGCCAACA ACACCCTGCT GCTCGCGCAG
CTTGACGACG TCCCGGCCGA CCGGCGCGGC GCCGCCTTCG TCTGCGCGGC GGCCCTGGTC
ACCCCGGACG GCGTCGAACG GGTCGCCCAC GGCGAGCTAC GTGGCACCCT GCTGACCGAA
CCTCGCGGCG TGGGCGGCTT CGGCTACGAC CCACTGTTCC TGGCCGACGG TCAGACCCGG
ACGAACGCCG AACTGTCCGC GGCGGAGAAG GATGCGATCA GCCACCGCGG CCGAGCCTTC
GGCGAACTGG CCCTGGTCCT CGGCGAGGTC CTCGCCGCCC CACCCACCCC CGCCACCGAC
TGA
 
Protein sequence
MSAEHHGSAR TTKVVLASRN EAKLAELRRI LAASGLAVEL VGLPPGEEVP ETGTTFAENA 
LIKARAAVAE TGLPAVADDS GLAVDELAGM PGVRSARWSG WRDGTRVERD TANNTLLLAQ
LDDVPADRRG AAFVCAAALV TPDGVERVAH GELRGTLLTE PRGVGGFGYD PLFLADGQTR
TNAELSAAEK DAISHRGRAF GELALVLGEV LAAPPTPATD