Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0869 |
Symbol | |
ID | 3903852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 1012117 |
End bp | 1012779 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637878202 |
Product | putative deoxyribonucleotide triphosphate pyrophosphatase |
Protein accession | YP_479982 |
Protein GI | 86739582 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCG AACACCACGG ATCGGCCCGG ACGACGAAGG TGGTCCTCGC CAGTCGCAAC GAGGCGAAGC TCGCGGAGCT GCGCCGCATC CTGGCGGCCA GCGGCCTGGC CGTGGAGCTG GTGGGCCTGC CGCCAGGCGA GGAGGTGCCC GAGACCGGGA CGACCTTCGC CGAGAACGCT CTGATCAAGG CGCGGGCGGC GGTCGCGGAG ACCGGGCTGC CCGCGGTCGC CGACGACTCC GGGCTCGCCG TCGACGAGCT GGCCGGGATG CCGGGGGTGC GCTCGGCTCG ATGGTCGGGC TGGCGCGACG GCACCCGGGT CGAACGGGAC ACCGCCAACA ACACCCTGCT GCTCGCGCAG CTTGACGACG TCCCGGCCGA CCGGCGCGGC GCCGCCTTCG TCTGCGCGGC GGCCCTGGTC ACCCCGGACG GCGTCGAACG GGTCGCCCAC GGCGAGCTAC GTGGCACCCT GCTGACCGAA CCTCGCGGCG TGGGCGGCTT CGGCTACGAC CCACTGTTCC TGGCCGACGG TCAGACCCGG ACGAACGCCG AACTGTCCGC GGCGGAGAAG GATGCGATCA GCCACCGCGG CCGAGCCTTC GGCGAACTGG CCCTGGTCCT CGGCGAGGTC CTCGCCGCCC CACCCACCCC CGCCACCGAC TGA
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Protein sequence | MSAEHHGSAR TTKVVLASRN EAKLAELRRI LAASGLAVEL VGLPPGEEVP ETGTTFAENA LIKARAAVAE TGLPAVADDS GLAVDELAGM PGVRSARWSG WRDGTRVERD TANNTLLLAQ LDDVPADRRG AAFVCAAALV TPDGVERVAH GELRGTLLTE PRGVGGFGYD PLFLADGQTR TNAELSAAEK DAISHRGRAF GELALVLGEV LAAPPTPATD
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