Gene Francci3_0861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0861 
Symbol 
ID3904343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1003962 
End bp1004657 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content74% 
IMG OID637878194 
ProductNUDIX hydrolase 
Protein accessionYP_479974 
Protein GI86739574 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.314952 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCCG CCCTCGCCGT CAGCGTGGAC GTGGTTCTGC TGACCCTGCG CGCCGGTCGG 
CTCTGTGTCC TGGTCATCCG CCGGGACGAT CCCCCGTTCG GCGGATGCTG GGCGCTGCCC
GGTGGTTTCG TCGACCGCGA CGAGGATCTC GACGCCTCGG CCCTGCGGCA GCTCGCGGCC
GAGACGGGCG TCACGACGAC CGGTCACCTC GAGCAGTTGC GGACCTACGG CGGCGCGCAC
CGCGACCCGC GTGTCCGGGT GGTCAGCGTG GCCTACCTGG CCCTGCTGCC GAATCTCCCG
CAGCCGCAGC CACAGCCCGG CCGGGATGGA CCGCGGGCCC GCTGGTGGCC GGTGGAGGAC
CTGGACTCGA CCGACGGCCC GACGCTGGCC TTCGACCATC CGCGGATCGT GGGGGACGGC
GTGGAGCGGG CCCGGGCCAA GTTGGAGTAC ACCCCGCTGG CCGCCGCCTT CTGCGAGGAG
CAGTTCACCC TGGCCGACTT GCGCCGCGTC TACGAGGCCG CGTGGGGCGT CGCGTTGGAT
CCGCCGAACT TCCGCCGCAA GGTGCTGTCC ACGCCGGGAT TCGTCGTACC GCTGGGCCAG
CGCACCTCCC CGCGCGGTGG CGGTCGGCCC GCCGAGCTGT ATCGGCGTGG CTCGGCGGTC
GCGCTGCACC CGCCGCTGCT GCGCCGGTCG GTCTGA
 
Protein sequence
MPPALAVSVD VVLLTLRAGR LCVLVIRRDD PPFGGCWALP GGFVDRDEDL DASALRQLAA 
ETGVTTTGHL EQLRTYGGAH RDPRVRVVSV AYLALLPNLP QPQPQPGRDG PRARWWPVED
LDSTDGPTLA FDHPRIVGDG VERARAKLEY TPLAAAFCEE QFTLADLRRV YEAAWGVALD
PPNFRRKVLS TPGFVVPLGQ RTSPRGGGRP AELYRRGSAV ALHPPLLRRS V