Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0861 |
Symbol | |
ID | 3904343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 1003962 |
End bp | 1004657 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637878194 |
Product | NUDIX hydrolase |
Protein accession | YP_479974 |
Protein GI | 86739574 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.314952 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCCCG CCCTCGCCGT CAGCGTGGAC GTGGTTCTGC TGACCCTGCG CGCCGGTCGG CTCTGTGTCC TGGTCATCCG CCGGGACGAT CCCCCGTTCG GCGGATGCTG GGCGCTGCCC GGTGGTTTCG TCGACCGCGA CGAGGATCTC GACGCCTCGG CCCTGCGGCA GCTCGCGGCC GAGACGGGCG TCACGACGAC CGGTCACCTC GAGCAGTTGC GGACCTACGG CGGCGCGCAC CGCGACCCGC GTGTCCGGGT GGTCAGCGTG GCCTACCTGG CCCTGCTGCC GAATCTCCCG CAGCCGCAGC CACAGCCCGG CCGGGATGGA CCGCGGGCCC GCTGGTGGCC GGTGGAGGAC CTGGACTCGA CCGACGGCCC GACGCTGGCC TTCGACCATC CGCGGATCGT GGGGGACGGC GTGGAGCGGG CCCGGGCCAA GTTGGAGTAC ACCCCGCTGG CCGCCGCCTT CTGCGAGGAG CAGTTCACCC TGGCCGACTT GCGCCGCGTC TACGAGGCCG CGTGGGGCGT CGCGTTGGAT CCGCCGAACT TCCGCCGCAA GGTGCTGTCC ACGCCGGGAT TCGTCGTACC GCTGGGCCAG CGCACCTCCC CGCGCGGTGG CGGTCGGCCC GCCGAGCTGT ATCGGCGTGG CTCGGCGGTC GCGCTGCACC CGCCGCTGCT GCGCCGGTCG GTCTGA
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Protein sequence | MPPALAVSVD VVLLTLRAGR LCVLVIRRDD PPFGGCWALP GGFVDRDEDL DASALRQLAA ETGVTTTGHL EQLRTYGGAH RDPRVRVVSV AYLALLPNLP QPQPQPGRDG PRARWWPVED LDSTDGPTLA FDHPRIVGDG VERARAKLEY TPLAAAFCEE QFTLADLRRV YEAAWGVALD PPNFRRKVLS TPGFVVPLGQ RTSPRGGGRP AELYRRGSAV ALHPPLLRRS V
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