| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0852 |
|---|
| Symbol | |
|---|
| ID | 3904334 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 992808 |
|---|
| End bp | 994163 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637878185 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_479965 |
|---|
| Protein GI | 86739565 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.344076 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGCGA GATCGCTCGT CGCCGCCGCC GCCATTGTGC TGTCGTCGCT GGCGCTCGTC
GCCTGCGGCA GCCGGGCCAG TAGCAGCGGA ACGACCTCGG CCGGCAACAA ACCGGCCGGG
GTGTCGAACA ATACAGCTTC GGATATCGGC GTCACGCCGA CCGAGATCAA GATCGGTACA
ATCGCTGGCC TGAGCAGCGG TTTCGGACCG GACACGTTCT CCGCCTCACT GTACGGGGCG
CGGGCCTATT TCAAGGCGCT CAACGCCGCG GGCGGAGTAA ACGGGCGCAC CGTGAACCTC
GTCGAGTGTG ACGACAAGGG CAGCGGGGAC GGAAATGCGA ACTGCGCGCA CAAGCTCGTC
GACGACGAGA AGGTCTTCGC GCTCGCCGGG GTGACGGCGT TCGACTACAC GGGTGCGCAG
TACATCAACT CCAAGGGTGT TCCGGATATC GGCGGCCAGC CCGTGTCCGC CGCCTACGAT
CAGTATCCGC ACCTGTACTC GATCTACGGC AGCTATTATC CGCGCACCGG CAGCCGTCCC
GGCTACAACG GCACGCTCTA CGCGGGGACC GAGATCTACC GCTGGTTCAA GCAGAATCTG
AAGACCAACG TCGCCGGGGT TGTGTACTAC AACGTCGCCC CGTCGGAGCG GTACGCCAAG
TCGATCGCGG ACGGCCTGCG CAAGGAGGGC TACACGGTCG TCGAGGAGCA GATCAATCTC
GGCGCCCCGA GTTGGGACGC AACGGTCCTC GACCTCAAGC GGCGCGGCGT CCAGATCGTC
TTCGACGCGA TGGACGACGG CGGTAACGCT CAGCTGTGCA ACGCCATCGA GTCCCAGAAA
CTGCCGATCA CGGCGAAGGT GACCCCGCCG CAGGGCTGGG CCAACAACAT CCGCCAGGTC
TACAGCGCCT CCCCGAACTG CCGGAACACG ATCTACTCCA CCGGCGGCAC CGCCAACTAT
GCGGACACTC AGATTCCCGC GGTCGCCACG TTCCAGAAGG ATCTGCAGGC GGCCGCGCCC
GATCGGGTGG CCAAGATGAA CCTGTGGATG CTCGAGGGTT ACGCCTCGGC CCAGTGGCTG
ACCGACGCGA TCCGCTCCTG CGGCGCCGAC GTCACCCGCG CCTGCGTCGA GGCGTACATG
AACAGCGGCA AGGACTACGA CGGTCACGGC CTGCTCATCC CGACCGGCCG GAACTTCAAG
AAGTCGCCTG AACCGCCGTC GCAGGAGGAG AACTGCCTCA ACGTCGCCCG TTGGCAGGAC
TCGGCGAACG GCAACCAGGG TGGCTGGGTG ACCCAGGTCA AGGACATGAA CACCAACTGC
TTCACCGTCC CGGATCTGCC CTACCCGGCC GGCTGA
|
|---|
| Protein sequence | MRARSLVAAA AIVLSSLALV ACGSRASSSG TTSAGNKPAG VSNNTASDIG VTPTEIKIGT
IAGLSSGFGP DTFSASLYGA RAYFKALNAA GGVNGRTVNL VECDDKGSGD GNANCAHKLV
DDEKVFALAG VTAFDYTGAQ YINSKGVPDI GGQPVSAAYD QYPHLYSIYG SYYPRTGSRP
GYNGTLYAGT EIYRWFKQNL KTNVAGVVYY NVAPSERYAK SIADGLRKEG YTVVEEQINL
GAPSWDATVL DLKRRGVQIV FDAMDDGGNA QLCNAIESQK LPITAKVTPP QGWANNIRQV
YSASPNCRNT IYSTGGTANY ADTQIPAVAT FQKDLQAAAP DRVAKMNLWM LEGYASAQWL
TDAIRSCGAD VTRACVEAYM NSGKDYDGHG LLIPTGRNFK KSPEPPSQEE NCLNVARWQD
SANGNQGGWV TQVKDMNTNC FTVPDLPYPA G
|
|---|
| |