Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0838 |
Symbol | |
ID | 3905115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 978266 |
End bp | 980611 |
Gene Length | 2346 bp |
Protein Length | 781 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637878171 |
Product | xanthine dehydrogenase, molybdenum binding subunit apoprotein |
Protein accession | YP_479951 |
Protein GI | 86739551 |
COG category | [C] Energy production and conversion |
COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
TIGRFAM ID | [TIGR03196] xanthine dehydrogenase D subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCTGG GGATCGGTCG TCCGGTGCGT CGTCCGGATG GGCCGGACAA GGTGACCGGT AGCTTCTCCT ACGTTGGTGA TCTGCGTGTT CCGGGGATGG TGCACGCCCG CACCCTGCGA TCGCCCCATG CCCGGGCGCG GATCCGGCGC GTCGACGTCG ACGCCGCGCG CCGGCTGCCC GGCGTTGTGG GGATGGTGAC CGCCGCCGAC GTCCCCGGCA TGGCCACCTA CGGGCTGATC GTCGCCGACC AGCCGGTGTT CGCCGCGACC GAGATTCGGT ACGCAGGGGA GCCGGTCGCC GCCGTGGCCG CGGTTGACGT CCGGACCGCG CGCCGGGCGC TCGCCGCGAT CGAGGTGGAC TACGAGCCGC TGGCACCTTC GACCGACCCC GACCGGGTAT GGCAGCCGGA TGCCGAGCCG CTGCATCCGG CGGGCAACCT GTACCGCGAG ATCGAGCTGC GCCACGGGGA TCCCGACGCG CTCGGCCCGG TGGTGGTCGA GGACCAGTAC CTCGTCGGGA TGCAGGACCA GGCGTTTCTT GCTCCCGAGG CGGCCCTGGC GATGCCGGCC GCCGATGGTG GGGTGGACCT GCGGGTGGCG ACCCAGTGGC TGCATTCGGA CCGGGAGCAG ATCGCGGCCT GCCTCGGTCT CCCGGAGGAG CTCGTCCGTC TCACCCTGGC CGGTGTGGGG GGTGCCTTCG GCGGCCGGGA GGACGTCACC CTTCAGATCC ACGGCGCCCT GCTCGCCCGG GCTACGGGGC TTCCGGTGCG GATCGCCTAC GACCGGGTTG AGTCCTTCCT GGGCCATCCG CACCGGCATC CGGCCCGGAT GTGGTTCCAG CACAGCGCCA CCGCCGACGG AAACCTGGTC AGCGTGCGGG CACGGCTGGT GCTGGATGGC GGTGCCTACG CGTCGTCCTC GCCGGCGGTG CTGGCGAACG CGGTCACCCA TGCCGCGGGT CCGTACCGGG TCCCGAACGC CCACCTGCAC GGAGTCGTCG TGCGGACCAA CAACCCCCCG TGCGGCGCCA TGCGGGGGTT CGGGGTGCCG CAGGTGACCA TCGGTCACGA GGCCCAGATG GACCGGCTGG CCGACGCCCT CGGCATGGAT CCGGTGGACC TGCGCGTCCG CAATGCCGTC CGACCGGGGG ATGTGCTGCC CACTGGTCAG GTGATGGGCG CACCGCTGCC GGCGCGGGAG GTCATCGAGG CGGTGGCCTC GCGTCCGCTC CCGCCGGCGA TGCCGGCGAA CGTCGCGGTG ACCGCGTTGC CCGGCGGCCG ACCGGCCGCG GCCGAACCGA GCCGGGTCCG TCGGGGGGTC GGCTACGCCC TGGCCTACAA GAACCTGCTC TTCTCGGAGG GCATGGACGA CTCCTCCGTC GCCCGTGCCC GCCTGGAGCT GGCTGAGGAC GGAACGGTAC GGGTCCGGCT GCACAGCGCG TGCGCCGAGG TGGGCCAGGG GTTTGTGACG ATCGCGGGGC AGATCGCCCG CACCGAGCTC GGCGTCGAAC AGGTCGTGTT GGCGCCCGCG GACACCGCGG TCGGCAGTGC CGGATCGACC AGCGCGTCCC GGCAGACCTG GATGAGCGGA GGCGCCGTGC GCGGAGCCTG CGCCGCGGTC GCCGATCGCC TGCTCGCCCG GGTCGCCCGC ACCGCGGGGC TGCCCGCGGA GGTCGTCGAG GCACCTCGAC GGACGCTGAC CGTCAACGCC GGGGAGATCG TCGGGGTGGA GGCCGGGTTG CGGGTTCCGC TCGCCGAGGC GCTGGCCGAC GGGCCGATCG AAGCGGAGTA CACCTTCCAC CACCGGCGTA CCTCCGCGCT GGACGCCGAC GGACAGGGCG ATCCGCACGT GGCCTTCGCC GCCGCGGCGC ACCGCGCGGT TGTCGATGTC GATGTCGACC TCGGTCTCGT GCGGGTCGTG TCGATGGCGC TGGCCCAGGA CTGCGGTACG GTGCTCAACC CCCTGGCGCT GCGTGGTCAG GTCGAGGGGG GAACTGCCCA GGGGCTGGGC CTCGCCGTCA TGGAGGAGCT GGTCACGGTG GACGGGGTGG TGGTCAATCC CACGTTTCAC GACTATCTGC TGCCGACCAT CGCCGACGTC CCGGACCTCG ATTTCGTCGC CGTCACCCAT CCGCAGCCGG ATGCGCCCTA CGGGGTGAAG GGCGTGGGGG AGGCGCCTAC CTGTACCGCG ACCCCGGCGA TCATCGCGGC GATCCGGGTC GCCGTCGGAC GGGATCTGCG GCGCGTTCCG GTACGACCCG AGGACCTCGT CACCATCTCT CCGATGACCG CGCCTCCGAC GACCGCGCCT CCGACGACGC CGGGACAAGG TGTTCCGGCG GCATGA
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Protein sequence | MSLGIGRPVR RPDGPDKVTG SFSYVGDLRV PGMVHARTLR SPHARARIRR VDVDAARRLP GVVGMVTAAD VPGMATYGLI VADQPVFAAT EIRYAGEPVA AVAAVDVRTA RRALAAIEVD YEPLAPSTDP DRVWQPDAEP LHPAGNLYRE IELRHGDPDA LGPVVVEDQY LVGMQDQAFL APEAALAMPA ADGGVDLRVA TQWLHSDREQ IAACLGLPEE LVRLTLAGVG GAFGGREDVT LQIHGALLAR ATGLPVRIAY DRVESFLGHP HRHPARMWFQ HSATADGNLV SVRARLVLDG GAYASSSPAV LANAVTHAAG PYRVPNAHLH GVVVRTNNPP CGAMRGFGVP QVTIGHEAQM DRLADALGMD PVDLRVRNAV RPGDVLPTGQ VMGAPLPARE VIEAVASRPL PPAMPANVAV TALPGGRPAA AEPSRVRRGV GYALAYKNLL FSEGMDDSSV ARARLELAED GTVRVRLHSA CAEVGQGFVT IAGQIARTEL GVEQVVLAPA DTAVGSAGST SASRQTWMSG GAVRGACAAV ADRLLARVAR TAGLPAEVVE APRRTLTVNA GEIVGVEAGL RVPLAEALAD GPIEAEYTFH HRRTSALDAD GQGDPHVAFA AAAHRAVVDV DVDLGLVRVV SMALAQDCGT VLNPLALRGQ VEGGTAQGLG LAVMEELVTV DGVVVNPTFH DYLLPTIADV PDLDFVAVTH PQPDAPYGVK GVGEAPTCTA TPAIIAAIRV AVGRDLRRVP VRPEDLVTIS PMTAPPTTAP PTTPGQGVPA A
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