Gene Francci3_0831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0831 
Symbol 
ID3905108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp970416 
End bp971213 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content76% 
IMG OID637878164 
Productputative urease accessory protein 
Protein accessionYP_479944 
Protein GI86739544 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0830] Urease accessory protein UreF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGATTG AGGGCGATAC CGCACGGGAC GGCGGGACCG AGGACGTGGC TGGTCCGACC 
GGGCGATCCG GACGGCGGGC GACGCTGCTG GTCCTCGCGG ACGGCCGGAT GCCCACGGGA
GGTCACGCCC ACTCGGGCGG TGTTGAAGCA GCGGTGACGG ACGGGAGTCT GGCGAACCTG
TCCGACCTGG CGGCCTTCCT CGTCGGACGG CTCACCACGA CCGGCCTGGT CGCCGCGGCC
TTCGCGGCCG CAGCCTGCCG GGCCGGCACG CAGCCGGGTC CCGCGACGCG GGCGCCACAC
GCCGACCACG TCCCCACCGC ATCCGTCACA CCCGTCACCA TCGTCACACC CACCACCATC
GCCACCTTGG ACGCCGAGCT CGACGCCCGG ATGCCCTCCC CCGCCCAACG CGACGCGAGC
CGGGCTCAGG GGCGCACGCT GCTGCGAGCG GGCCGGGCCG CCTGGCCCGT GCCGCCCGGT
CCACGTGCAC CGCACCACCC GTGCGCACTA GGCATGGTCG CCGCGGGCGC GGGCCTGCGT
CCCTCGGACG CCGCCCTGGT CGCCGCCCAC ACCACGGTCA CCGGACCCGC GACCGCCGCG
ACCCGCCTGA TGGGGCTGGA CCCCTTGGCC GTCACCGCCG TGCTCGCCCG GCTCACCGAC
GAGGTCGAGG CGATCGCGCT GGCCGGCGCG GAGGCTTCCC GACGCCCGCC CCGGCTGCTG
CCCGCCGTCA CCGGTATCCG CCTCGATCTC CTGGCCGAAC GGCACCGCAC CACGGCGCTA
CGGATGTTCA CATCCTGA
 
Protein sequence
MTIEGDTARD GGTEDVAGPT GRSGRRATLL VLADGRMPTG GHAHSGGVEA AVTDGSLANL 
SDLAAFLVGR LTTTGLVAAA FAAAACRAGT QPGPATRAPH ADHVPTASVT PVTIVTPTTI
ATLDAELDAR MPSPAQRDAS RAQGRTLLRA GRAAWPVPPG PRAPHHPCAL GMVAAGAGLR
PSDAALVAAH TTVTGPATAA TRLMGLDPLA VTAVLARLTD EVEAIALAGA EASRRPPRLL
PAVTGIRLDL LAERHRTTAL RMFTS