Gene Francci3_0825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0825 
Symbol 
ID3905102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp963905 
End bp964270 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content77% 
IMG OID637878158 
Productputative transcriptional regulator 
Protein accessionYP_479938 
Protein GI86739538 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.661456 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGAAT CGTCCGACGG CCCGCGGGCC TGTCCGATCG CGCGGACGCT GGAGGTCGTG 
GGTGAGCGCT GGTCCCTGCT GGTCATCCGG GAGATCACGC TGGGGGTCCA CCGCTTCGAG
GGCATCCGGG CCGGCACCGG GGCGCCCCGA GCCGTGCTGG TCGAGCGGCT GCGGGCGCTG
GAGCGCGCGG GGGTGCTGGA GCGTCAGCCG TACCAGGAGG CGGGCGCCCG GTCCCGGCAC
GAGTACCGGC TGACGTCCTC CGGCCGGGAC CTGGCACCGG TCCTGCTGGC CCTGCGCCGG
TGGGGTGAGC GGCACGCCGC ACCGACCCGG CCGCCCGCGG CCGATCGCGG CGCCGCATCC
GGCTGA
 
Protein sequence
MQESSDGPRA CPIARTLEVV GERWSLLVIR EITLGVHRFE GIRAGTGAPR AVLVERLRAL 
ERAGVLERQP YQEAGARSRH EYRLTSSGRD LAPVLLALRR WGERHAAPTR PPAADRGAAS
G