| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0824 |
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| Symbol | |
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| ID | 3905101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 962325 |
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| End bp | 963818 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637878157 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_479937 |
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| Protein GI | 86739537 |
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| COG category | [F] Nucleotide transport and metabolism
[I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein
[COG0775] Nucleoside phosphorylase |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCCG GTCGGTCGGG CCTCAGCGCG GACACCGTCA TCGTGCGCAC CGGCATGGGT
CCGGAACGGG CGCGCAAGGC CGCCCGGCTG GTGCGCGACA CAGGCCCGGA CGCCGTCGCC
CTCGTCGGTC TCTCCGGGGG ACTGGCGGCC GGGATCGAGC CCGGTGACGT CGTCGTGGCC
AGCGAGATCC GCAACGCCGA CGGCACCGTC GCCGGCCGTT GCGCGGCCGC GCCCCTGCTG
GCCGGCGACC TGCGCCGGCT CGGGCTCACC GTGCACGTCG GCCCGATCGT CACCGTGCCG
CGGCTCGTCG GCGGCACGGC CCGCGCGGAA CTCGCCGCGA CCGGGGCCCT TGCCGTCGAC
ATGGAGTCCG CGGAGCTGGC GGCGGGAGTC GGCGACGTGC CGTTCGCCGC CGTCCGCGTC
ATCGTCGACA CGGCGGCGCA GCCGCTGGGA CGTATCGACC TGGCCCGCCG CGGAATCCGT
GGTCTGCGCA CGATGCGTCC GCTCGGGCGC CCCATCGAGG CGTGGGCCGC CGCGGTCGGC
CGTCGCCAGG TTCTGCTCGC CGAGCCGCGG GCGTTCTGCG CCGGCGTCGA ACGGGCGATC
GAGGTCGTCG AGCGCGCCCT GGAGATCTAC GGCGCGCCGG TCTACGTCCG TAAGCAGATC
GTGCACAACG CCCACGTGGT AGCCGACCTG GCCAGCCGTG GAGCGATCTT CGTCGAGGAG
CTCGACGAGG TGCCCGGCGG CTCGACGGTC GTCTTCTCCG CGCACGGAGT GGCCCCGGCC
GTCTGGGACC AGGCGGGCGA GCGCGGCCTG TCCGTTATCG ACGCCACCTG TCCGCTGGTG
GAGAAGGTGC ACACCGAGGC CCGCCGGTTC ACCGCCCGCG GGGACACCGT GCTGCTCATC
GGCCATTCCG GCCACGAGGA GGTGGACGGA ACCCTCGGCG AGGCGCCCGG CCGCATCACG
CTGGTCGAGT CCTCGGCCGA CGTCGGCTCC CTCGACGTTC CCGATCCCGA GCGCGTTACC
TACCTCATGC AGACCACGCT GGCCCTGGAC GAGGCCGCGG AGGTCGTCGA CGCGTTGACG
GAGCGGTTCC CGGCGATCGT CGGGCCGGGC TCCACCGATA TCTGCTACGC GACCTCGAAC
CGGCAGAACG CGGTCCGCAA GGTTGCCGAG GAGGCCCAGC TCGTCCTCGT CGTCGGCTCG
GCCAACAGCG CGAACTCCGT GCGGCTCGTC GAGGTGAGCA GGCGCGACGG CGTCGAGGCG
CATCTGGTCG GGGACGTCGG GGACGTGCAT CTGTCCTGGC TTGCCGGCGT GGACACGATC
GGCATCTCGG CCGGCGCCTC GGCCCCGCCG TCCCTCGTCA ACGAGCTCCT GACCGCGTTG
TCGGGTCTCG GCGCGACGGA CGTCTCGGTG CGTTCCGTCG GCACCGAGAC GCTCGCCTTC
CACCTGCCCA AGGAACTGCG CCGACCGGCC CCGGCGCCCG TTCCAGGGCC ATAG
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| Protein sequence | MAAGRSGLSA DTVIVRTGMG PERARKAARL VRDTGPDAVA LVGLSGGLAA GIEPGDVVVA
SEIRNADGTV AGRCAAAPLL AGDLRRLGLT VHVGPIVTVP RLVGGTARAE LAATGALAVD
MESAELAAGV GDVPFAAVRV IVDTAAQPLG RIDLARRGIR GLRTMRPLGR PIEAWAAAVG
RRQVLLAEPR AFCAGVERAI EVVERALEIY GAPVYVRKQI VHNAHVVADL ASRGAIFVEE
LDEVPGGSTV VFSAHGVAPA VWDQAGERGL SVIDATCPLV EKVHTEARRF TARGDTVLLI
GHSGHEEVDG TLGEAPGRIT LVESSADVGS LDVPDPERVT YLMQTTLALD EAAEVVDALT
ERFPAIVGPG STDICYATSN RQNAVRKVAE EAQLVLVVGS ANSANSVRLV EVSRRDGVEA
HLVGDVGDVH LSWLAGVDTI GISAGASAPP SLVNELLTAL SGLGATDVSV RSVGTETLAF
HLPKELRRPA PAPVPGP
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