| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0818 |
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| Symbol | |
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| ID | 3906445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 953690 |
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| End bp | 954526 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637878151 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_479931 |
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| Protein GI | 86739531 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCACCC GGTCTCGCCC CGCTTTCGGT AACGGAGTGT CTACATCTCT CACCGGGCTG
GCCCTACGGG CCGGCTCGGT CGTCTCGACC TGGCCGCCCC GGACCGCCGT CATCACGGGA
GCATCCAGCG GTATCGGCCG GGAGGCCGCG CTGCTGCTGG CCGCGGACCG ATGCCGGTCG
CTGCTGGTCG GTCGCAACGG GGCCGCGCTT GACGAGGTGG CCGCGGCGAC CGAGGGGCAC
CGGATCGCGG TCGACCTGTC TAGTCCCGGC TCGGAACTGA TGGTCTCCTC CCGGGCGACC
GAGCTTCTCG GCGAGGTCGA CCTGCTGGTG TGCTCGGCAG GCCTCGGGGC GGCGGGCCCG
TTCGAGGTAA TGTCCCCGGC CGCGATCGCG GAGCTGGTCA CGGTCAACGT GCTGTCGCCG
ATGATGCTGG TCCGGGCCAT GTTGCCGGCC ATGCTCGACC GCGGCCAGGG GCGCATCCTG
CTGGTGGGCA GCATCGCCGG CGCGCTGGGA GTGCGCGGTG AGGTCGCCTA TTCCGCAACC
AAGGCCGCTC TGCTCGGTTT CGCCGACGCG TTGCGGTCCG AGGTTGCCGG TCGCGGTGTG
ACGGTGACCC TGTGTCTACC TGGTGTCGTC GACACACCAT TTTTCCACCG CCGTGGCGCG
CCCTACGTCC GTCGCTGGCC CCGGCCCATA CCGGCCGGGC TTGTCGCGCA GCGCATGCTG
GCGGCCACCG GACGCGGCGA CGCTGAGATC TGGGTGCCAC GCTGGTTACT CGGCGCGGTG
CGGGTCCACG GTGCGATCCC GTCGGTCTAC CGCAGGCTGG CGGGTGTCTT CGGATGA
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| Protein sequence | MSTRSRPAFG NGVSTSLTGL ALRAGSVVST WPPRTAVITG ASSGIGREAA LLLAADRCRS
LLVGRNGAAL DEVAAATEGH RIAVDLSSPG SELMVSSRAT ELLGEVDLLV CSAGLGAAGP
FEVMSPAAIA ELVTVNVLSP MMLVRAMLPA MLDRGQGRIL LVGSIAGALG VRGEVAYSAT
KAALLGFADA LRSEVAGRGV TVTLCLPGVV DTPFFHRRGA PYVRRWPRPI PAGLVAQRML
AATGRGDAEI WVPRWLLGAV RVHGAIPSVY RRLAGVFG
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