Gene Francci3_0805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0805 
Symbol 
ID3906432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp936806 
End bp937459 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content69% 
IMG OID637878138 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_479918 
Protein GI86739518 
COG category[R] General function prediction only 
COG ID[COG2514] Predicted ring-cleavage extradiol dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCCAC GTCGGGCACC CCGCGTACCA ACGGGTTTCC GATGTGGCGG CTGTGGCGGG 
CGTGGCGGCC GCGCGTCACA GCGGCCCGGC CCCGTGGGCA TGCCGTCGCG GGCAACGTCG
TTGTACGGAG TTGTTGTATG GATAACGGCT ACCAGACGAC CAGCGCCTCG GGAGATCACC
GTGGAGATCA AGGAACTGGG ACATCTCGTC CTCTACGTCC GGGACATCGA GCGTTCCAGC
GCCTTCTACC GGGACGTACT CGGCTGGCGG CAGATCTTTC CCGACCCGGC GGGCGCGGAC
GGCAACCCAC TGCGGGCCCC CGCCGCCGCG TTCTCCTCCG GACGCACCCA CCACGAGCTG
CTCCTCATCG AGGTCGGCGA GGACGCGGCG GCCATACCCC AGGGCCGGCG GGTGGGATTG
TACCACTTCG GGCTGAAGGT TGGCGACAGC GACGACGAGC TGCGCGCGGT GCTCGCCCGT
CTGCACGACG CGGATGTGAC CGTCGTCGGC GCGTCGGATC ACACGGTCAC CCACAGCTTG
TACATCCTCG ACCCGGATGG CAACGAGATC GAGCTCTACA TCGACGTTCC CGGGGTCGAC
TGGCGGAGCA CTCCCGCGCT CGCCGCGGCT CCGGTCCGTC CGTTGCGGCT CTGA
 
Protein sequence
MFPRRAPRVP TGFRCGGCGG RGGRASQRPG PVGMPSRATS LYGVVVWITA TRRPAPREIT 
VEIKELGHLV LYVRDIERSS AFYRDVLGWR QIFPDPAGAD GNPLRAPAAA FSSGRTHHEL
LLIEVGEDAA AIPQGRRVGL YHFGLKVGDS DDELRAVLAR LHDADVTVVG ASDHTVTHSL
YILDPDGNEI ELYIDVPGVD WRSTPALAAA PVRPLRL