Gene Francci3_0774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0774 
Symbol 
ID3905803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp900843 
End bp901346 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content68% 
IMG OID637878107 
ProductXRE family transcriptional regulator 
Protein accessionYP_479887 
Protein GI86739487 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.61227 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCGAG AGTACGCGAA GGCCGTGGGC GCCCGGTTGC GGGCGATTCG GATACAGCAG 
GGTCTGTCGC TGCAGGGAGT GGAGCAGAAG TCGCGGGGGC GGTGGAAGAC CGCTGCCGTT
GGTTCCTATG AGCGCGGTGA CCGCATGATC AGCGTGCATC AGCTCTCCGA ACTCGCGGGA
TTCTACGGAG TCCCGGTCTC GGCGCTGTTG CCCAACGAGG ATCAGCTGCC GCCGCGGGAG
CGTCGCCCAC GTACGGTGCT CAACCTGGAG AAGCTGAGCG AGGCTCCGCC GGACTCCTCT
GCTCTCGTTC GTCGGTGGGT CGCCCAGATC CAGCGCCAAC GGGACGACTA CGCCGGCCGC
GTGCTGTCCA TCCGGGATGG CGACGTGCGT GCGCTCGCCC TGCTCCACGA CACGACCCCC
CAGGAGTTCG CCGAGCGGCT GCGGACCTGG GGAGTGCTGG AGACCAGTTT CCCCGAAGAG
AGTAGCGAGG AGCCGCCGGA GTAG
 
Protein sequence
MSREYAKAVG ARLRAIRIQQ GLSLQGVEQK SRGRWKTAAV GSYERGDRMI SVHQLSELAG 
FYGVPVSALL PNEDQLPPRE RRPRTVLNLE KLSEAPPDSS ALVRRWVAQI QRQRDDYAGR
VLSIRDGDVR ALALLHDTTP QEFAERLRTW GVLETSFPEE SSEEPPE