| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0745 |
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| Symbol | fbiC |
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| ID | 3905813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 861113 |
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| End bp | 863812 |
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| Gene Length | 2700 bp |
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| Protein Length | 899 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637878078 |
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| Product | FO synthase |
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| Protein accession | YP_479858 |
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| Protein GI | 86739458 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily
[TIGR03550] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit
[TIGR03551] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAGTA CGGCGGCGAC ATCCAGCGGT GCCGAATCCA GCGGTGCCGA ATCCAGCGGT
GCCGAATCCA GCGGTGCCGA ATCCAGTTCC CCACCGTCCC CGTCGGCGCT ACGCCGGGCG
CTGCGCCGGG CCCGGGACGG CGCCACGCTC GACGTGGTAG AGGCCACCAT TCTGCTGGCC
GCGCGCGGCG ATGACCTCGC GGACCTGTGC CGCTCGGCGG CCGGGGTCCG CGACGCGGGT
CTGGCGTCGA TCGGGCGGCC GGGTGTCGTC ACCTACTCGC CGAAGGTGTT CATCCCGTTG
ACCCGGTTGT GCCGGGACCG CTGCCACTAC TGCACCTTCG CCACCGTGCC GCACCGGTTG
CCCGCCCCCT ACCTCACGGT GGACGAGGTG CTCGGCATCG CCCGGGCGGG CGCCGCGGCG
GGCTGCGCCG AGGCGCTGTT CACGCTTGGT GATCGTCCCG AGGATCGGTG GCCGGCGGCC
CGGGAATGGC TCGACGCCCA CGGCTACGAC TCGACGCTGG GTTACCTGCG TGCCGTCGCG
ATCGCCGTGC TGGAGGAGAC CGGTCTGCTT CCGCACCTCA ACCCGGGTGT ACTGAGCTGG
GTGGAACTCG CCCGGCTCAA GCCGGTGGCC CCGTCGATGG GGATGATGCT GGAGACGACC
GCGACCCGCC TGTGGTCGGA GCCGGGCGGG GCGCACTACG GATCACCCGA CAAGGACCCG
GCCGTCCGCC TGCGGGTCCT CACCGACGCC GGGCGGTTGT CGATCCCGTT CACGACCGGC
CTGCTGCTCG GCATCGGGGA GACCCGGACG GAGCGGGCCG AGACGATCTT CGAGCTTCGA
GGTCTGGCCC GCCGCTATGG GTCGATCCAG GAGGTGATCG TCCAGAATTT CCGCGCCAAG
GACGACACCG CGATGCGCTC CGCGCCCGAC GTCGGTGCCG AGGAGTTGGC CGCGGCCGTC
GCGGTCACCC GGCTGGTGCT GGGCCCCACG ATGCGGGTGC AGGCTCCGCC GAACCTCGTT
GACACCGTGG AGTGCGCCCT GCTGCTTTCG GCCGGCATCG ACGACTGGGG CGGCGTCTCC
CCGGTCACCC CCGACCACGT CAACCCCGAG CGGCCCTGGC CGGACCTGGA CGTCCTGGCG
GCCGTGACGG CGCAGGCCGG GTTCACGCTG CGGCCCCGGC TCACCGTCTA CCCCTCCCAT
CTCGGTGAAC CGTGGATCGA CCCGCGCCTG GCCGGACACG TCGGGGCGTT GGCCGGCGTG
GACGGCCTGC TCGCCGACGG CGTGCTCCCG GTCGGCCGCC CCTGGCAGGA GCCCGACGGC
GGACTCGCTG ACACCGGCCG CACCGATCTG CACGCCGCGG TCGACACGGT CGGGCGCCGC
AGCGAGAAAC GGGCGGACTT CGACACGGTC TACGGTGACT GGGAGTCGCT TCGGGCACAG
GTCAGCGCGG CCGGGACGGG GGTTGACGGA GTCGTCGGCA CGGGCAGCCG GGCCATCGCG
AGCCGGGCCG GCGCGGCTGC CGGTGCCGGT GCCATGCGGC GGATCGACCC CGACATGCTC
GCCGCCCTGC GCCACGCCGG GTCCGATCCG GCCGGGATCA CCGACGCCGA GGCGCTGACC
CTGTTCGGCG CGGACGGCGC CGCCCTGGAG GAGCTCTGCG CGCTCGCGGA CGGATTGCGC
CGCGACGTCG TGGGCGAGGA CGTCACCTAC GTCGTCAACC GCAACATCAA CTTCACCAAT
GTCTGCTACA CCGGATGCCG GTTCTGCGCG TTCGCGCAAC GCCGTGGGGA CGCCGACGCC
TACACGCTGT CCTTGGACGA GGTGGGCAGC CGGGCGGCGC AGGCCTGGGC GGTCGGCGCG
ACCGAGGTCT GCGTCCAGGG CGGGATCCAT CCCGATCTAC CGGGCGCCGC GTACTTCGAT
CTTGCCCGTG AGATCAAGCG GCAGGCGCCG GGGTTGCATC TGCACGCCTA CTCGCCGATG
GAGGTTCTCA ACGGCGTCAC CCGCACCGGC CTGTCGATCG GCGACTGGCT CACCGCGGCC
CGTGAGGCCG GCGTCGACAC GATCCCCGGC ACCGCGGCGG AGATCCTCGA CGACGATGTC
CGTTGGGTGC TGACGAAGGG CAAGCTGCCC GCGGCGAGCT GGGTCGAGGT GGTGACCACC
GCGCACCGGG TCGGCCTGCG CTCCTCGGCC ACGATGATGT ACGGGCACGT GGACACCCCC
GCACACTGGG TGGCCCATCT GCGCCTGCTA CGGCGCATCC AGGACTCCAC CGGCGGCTTC
ACCGAGTTCG TGGCCCTCCC CTTCGTCCAT CACAGCTCGC CGATCTACCT GGCCGGTGTC
GCTCGTCCCG GCCCCACCCG CCAGGAGAAC CGGGCTGTGC ACGCGATGGC GCGCATTCTG
CTGCACGGCT CGATCGACAA CATCCAGTGC TCCTGGGTCA AGCTCGGGGT GGAGGGCTGT
CGGGCCGTGC TCACCGGTGG GGCGAACGAC ATCGGCGGCA CGCTGATGGA GGAGACGATC
AGTCGGATGG CCGGCTCGCA GCACGGCTCG CGGCGCTCCG TGGCCGAACT CGAGGAGGTG
GCCGCGGGGG CGGGTCGTCC CGCTCGGCAA CGCACCACCA CGTATGGCCG GATCCCTGAC
GAGCGCTTTC GCGCTGCCCG GGGCCGCACC GTCCGGGCCA TGCTGCCGGT GGTGTCCTGA
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| Protein sequence | MMSTAATSSG AESSGAESSG AESSGAESSS PPSPSALRRA LRRARDGATL DVVEATILLA
ARGDDLADLC RSAAGVRDAG LASIGRPGVV TYSPKVFIPL TRLCRDRCHY CTFATVPHRL
PAPYLTVDEV LGIARAGAAA GCAEALFTLG DRPEDRWPAA REWLDAHGYD STLGYLRAVA
IAVLEETGLL PHLNPGVLSW VELARLKPVA PSMGMMLETT ATRLWSEPGG AHYGSPDKDP
AVRLRVLTDA GRLSIPFTTG LLLGIGETRT ERAETIFELR GLARRYGSIQ EVIVQNFRAK
DDTAMRSAPD VGAEELAAAV AVTRLVLGPT MRVQAPPNLV DTVECALLLS AGIDDWGGVS
PVTPDHVNPE RPWPDLDVLA AVTAQAGFTL RPRLTVYPSH LGEPWIDPRL AGHVGALAGV
DGLLADGVLP VGRPWQEPDG GLADTGRTDL HAAVDTVGRR SEKRADFDTV YGDWESLRAQ
VSAAGTGVDG VVGTGSRAIA SRAGAAAGAG AMRRIDPDML AALRHAGSDP AGITDAEALT
LFGADGAALE ELCALADGLR RDVVGEDVTY VVNRNINFTN VCYTGCRFCA FAQRRGDADA
YTLSLDEVGS RAAQAWAVGA TEVCVQGGIH PDLPGAAYFD LAREIKRQAP GLHLHAYSPM
EVLNGVTRTG LSIGDWLTAA REAGVDTIPG TAAEILDDDV RWVLTKGKLP AASWVEVVTT
AHRVGLRSSA TMMYGHVDTP AHWVAHLRLL RRIQDSTGGF TEFVALPFVH HSSPIYLAGV
ARPGPTRQEN RAVHAMARIL LHGSIDNIQC SWVKLGVEGC RAVLTGGAND IGGTLMEETI
SRMAGSQHGS RRSVAELEEV AAGAGRPARQ RTTTYGRIPD ERFRAARGRT VRAMLPVVS
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