| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0738 |
|---|
| Symbol | |
|---|
| ID | 3905865 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 853675 |
|---|
| End bp | 854976 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637878071 |
|---|
| Product | DNA polymerase III beta subunit family protein |
|---|
| Protein accession | YP_479851 |
|---|
| Protein GI | 86739451 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
|---|
| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.911699 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGTTCA GCGTGGAACG CGACGCGTTC GCCGACGCGA CCGGCTGGGC CGCTCGGCAT
CTGCCCAACC GGCCGGGCCC GGCCCGGAAC GTCCTGACCG GCATCCTGCT CGCCGCGGGC
CATGGCTCCC CGGCGTCTCC CGGTTCCGCG GCGGTTCCCC TGCCGTCGGG CTCCGCGGCG
TCTCCCGGTT CCGCGGCGGT TCCCCTGCCG TCGGGCTCCG CGGCGTCTCC CGGTTCCGCG
GCGCCCCTGG GGGCGGCCAC GGCCTCGGTC CTGACGATCT GCGCGTACGA CACGGAGGTG
GCGGTGCGGG CTCCGGTCGC GGCCTCGGTG GACGAACCGG GGCGGGTGCT GGTGCCCGGC
CGGCTCCTCA CGGACATCGT GCGCAGCCTG CCCGCGACGA CGGTCGACGT CGTGGTCGAC
GGTGACCGGC TGGTCCTGCG CTGCGGCAGC GTCCGTTTCA CCGTGCCGCT GATGGACCCG
GGTGAGTACC CGCAGCTCCC TAGCTTTCCC GGACCGATCG GCGAGGTGGA CACGCTTGGG
TTCGCGTCCG CGGTCGGTCA GGTCGCCCCG GCGGCAGGCC GGGACGAGAC CATGCCCGTG
CTCACCGCGG TCCGGATGGA GATCTCCGGG CGTGGGCTGG CCCTCGTCGC CACCGACCGG
TACCGGCTCG CGGTACGCGG CATACCCTGG CAGCCGACAG TCGACGATCC GTGGGCGCTC
GCGCACGTGC CTGCCAAGGT TCTCGCCGAG GTGGCCCGCA CGCCGACGTC GGCCTCCCGC
ATCGTGATTG GTCTGGACCT CGACGATCCG TCCGGCGCCC GGCTCGGCCT CGCCGCCGGC
GGCCGGCAGA CCATCGTCCG GCTCATCGAA GGGACGTTTC CCAACTACCG CAAGCTCCTG
CCCGAGGCGG CCGCGCTCGT CGTCACCGCG CAGACCGCGG CGCTCGCCGC GGCGGTCCGT
CGGGTGGCCG TCGTCGCCAC CCGCACCGGG CCGCTGCGGT TCACTTTCAC CCACAACCAG
GTCGTCGCCG AGGCCGGGGA CGGTGGTGGC GCACAGGCCA GCGAGACGAT TCCGGTCGAG
TACGCAGGTC CCGAGCTCTC GGTGCTGTTC AATCCGTCCT ACCTGCTGGA CGGGCTCGGT
GCCGTCGAGG ACGATCAGGC GACGATCGGG TTCGTTGACG ACGATCCGGT CGAGGCCGCC
GCGAAACCCG CGGTGCTCAC CGGCAAGGAC AGCGGCCGCG GCGCTGTCGA CGAGGGCGCC
TACCGCTACC TACTGATGCC GATCCGCCAC GGCGGGGGCT GA
|
|---|
| Protein sequence | MRFSVERDAF ADATGWAARH LPNRPGPARN VLTGILLAAG HGSPASPGSA AVPLPSGSAA
SPGSAAVPLP SGSAASPGSA APLGAATASV LTICAYDTEV AVRAPVAASV DEPGRVLVPG
RLLTDIVRSL PATTVDVVVD GDRLVLRCGS VRFTVPLMDP GEYPQLPSFP GPIGEVDTLG
FASAVGQVAP AAGRDETMPV LTAVRMEISG RGLALVATDR YRLAVRGIPW QPTVDDPWAL
AHVPAKVLAE VARTPTSASR IVIGLDLDDP SGARLGLAAG GRQTIVRLIE GTFPNYRKLL
PEAAALVVTA QTAALAAAVR RVAVVATRTG PLRFTFTHNQ VVAEAGDGGG AQASETIPVE
YAGPELSVLF NPSYLLDGLG AVEDDQATIG FVDDDPVEAA AKPAVLTGKD SGRGAVDEGA
YRYLLMPIRH GGG
|
|---|
| |