| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0725 |
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| Symbol | |
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| ID | 3903515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 834953 |
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| End bp | 837541 |
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| Gene Length | 2589 bp |
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| Protein Length | 862 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637878058 |
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| Product | HAD superfamily hydrolase-like |
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| Protein accession | YP_479838 |
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| Protein GI | 86739438 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5610] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.237174 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0738114 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTCACCG ACGTCCGGCT ACGCGAAGTG TGGTCGCACC TGGAGTCGGG CGGGGCACAG
GCCCTGACTC TGGATGTCTT CGACACCCTC CTGTGGCGCA TGGTGCCAGA GCCCGCCCAT
GCCTTCGTGC TGTTGGGCCG GCGGCTCGCG GACGCGGGCC ACCTGCCCGC CAGCGTCTCC
CCGGGCGAGT TTGCCCGGCT GCGGGTCCAC GCCGAGCAGC TGGCCCGCCT GCACGCCGAG
GCCACCCGCG GTACCCATGA GGTGCGGCTG GACGAGATCT GGCAGCTGCT GCTGCCTGCG
CTACCCGGTG CCCCCGGCGT CCAGGACCTC CTGGACGCAG AGGTCGCGGT CGAACGCGAG
CTCTGCCGCG CCGACCTCGC CGTGGTGGAG CTCGCCGAGC TCGCCATGAC GAAGCTCGGC
CTGCCGGTCT ACCTGCTGTC CGACACGTAC TTCTCGGCCG GCCAGCTCGA ACGGCTGCTG
AACCGGCCGG AGCTGGCCGG CGTGCCCTTC ACCCACATCT TCACCTCCTC CGACGCAGGG
ACGTCGAAGA GTGACGGGCT GTTCCAGCAC ATGCTCGCAG CGTCGAACCT GCGGCCGTCC
CGGGTCGTGC ACCTTGGCGA CCACCCCGTC GCCGACGTCG AGGGCGCCCG CGAGCACGGG
CTTGTCGCCA TCCATTACCC GAAGTACTCC GGGGCGCTGG AGCAGACCCT TGAGCTCGAG
GGTCTGCGTA AGGCGCCGAG CGACGACCTC CCGATCGACC CGGTAGACGG CGACTACGGG
ATGACCGCGT TGCGAGCCCG GTCACTGCAC CGTGCCGACG CCCTCGCGGT CCCCGCGGGG
CTGCGCCGGT ACTGGGAGGC CGGCGCGACG GTCTTCGGGC CGGTCTTCAC CGGTTTCGCG
GAGTGGGCTG TGGAACGGGC CCGTGACTTC GGCGCCGACC ACATCCACTG CCTGATGCGG
GAGGGCGACT TCCTTTCCCG CCTGCTCGTC GGTCCCGGCG AGGATGTCGG GGTCACCATT
TCGACGCTGT GGGCGTCGCG GCAGGTGTGC GCGCTGGCCA ACGTCTTCGA GGGCAACCCC
GAGGAGCTCA GGAGCTTCCT GGTCCGTCGG CACGCGCCGA GTGTGGGGCA GTTGCTGCGC
CAGCTCGGGG TCCGGCTGGA GAACGTCGCC GGCATCTCGG CGCTGGCCGA CCGCCGCCTC
GACGTGCCCG GCCTGCTCGA CGACACCCTC GAGGCGCTCT GTTCCGATGA GCGGATCCGC
AGCGAGATCG TGCTGACCGC GTCCCGCCTG CGTGAGCGTT ACGTGCGCTA CCTCGACAGC
CAGCTACCCG AGAGCGGCCG GGTCGTCTTC CTCGACCTGG GCTGGGGCGG GACGATCCAG
GCGCTGCTCA CCCGGCTGCT CGCCTCCACC GGCCGCGGGC TGGACATCCT CGGCCTGTAC
CTGGCTACGA ACCAGGCGGC GATGACGCAC CGGTTGGCCG GTCTGGAGCT GGAGGGATAT
GTTGCGACAA GCGGTCAGCC CGAGACCCTG GCGAACCAGC TCATGCGTAG CCCCGAGGTA
CTCGAGCAGC TTTGCATGCC CGACGTCGGG TCACTGGTCT CCTTCGACGA GATGGGTAAT
CCGGTGCTCA GCATCGACCG GACCTCGCGG ACGCAGGTCG CCCAGCGAGC CGCCGTCCAG
GACGGCGTCC TGGCCTTCCA GCGGGAATGG CTGCGTTACC GGCGCTCGGA GACCCCGATG
CCGTCGCTGG CCTGCGCCGG GGCGCGCCAG GCGGGGCTGC GGACGCTGAC CCGCTTCGTC
GCCCGGCCGA CCGCGGTGGA GGCCGCGGCC TTCGGTGCCT GGGCGCACGA CGACAACTTC
GGCTCCGACG CCACCGAGGG CCTGCTGCCG CCGGAGCTGG TCCGCCGGAT GCCGTATCTC
ACCCCGGCCG ACATCGACCG GATCTCCATG CGCGAGCTTT ACTGGCCCGC CGGGGTGGCC
GGGGTCGCGA ACCGGCCGCT GGCCGTGATC AGCGGGCTGG CCGCCGCCGC GGGCATCCCG
CCGGAGGAGG TCTCGCCCGA GGCCGCGGCG GGGCCCGTGG AGGTCTACAT CGACACGGGC
GGGGACTTCG TCAACGGTCC GAAGGAGACG GCGGTCACCC GGTCGGCCCG CGACGGCCTG
TCGATCGTCC GGCTCAGCCT GGAGGCGGTC GGGGTACGCC GGATCCGCAT CGACCCGGCG
GGTCGGCGCG GTCTGCTCCG CCTGGACTGG CTGACGCTGT CCTTTCATAT CAACAACACC
CCAGAGCCGG ACAAGATAAC CATCACCTCG CTGGACGATC CCGCCCAGCA GCTCGCCCTC
CTCGGCTGCC GGCTGCTCCA GCCGAACCTG GTAGAGATCA CCGGGGACGA CCCACAGTTC
GTCTACACGA TCGACCTCGC CACACAGCCG CAGCTCGCCG GGGTCTACGC CCTCGACGTC
GAGCTGGCGT TCGGCTGGAT GGGCATCCGG GGTGATCCGC TGGCCCTGCC CGCGGCGGAG
CCCGCCCGCG ACGGTCTGCC GCTGCGGGCG GCCCGCAAGA TCCGGCGCGA GCTCGGGGGA
TCGCGGTGA
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| Protein sequence | MFTDVRLREV WSHLESGGAQ ALTLDVFDTL LWRMVPEPAH AFVLLGRRLA DAGHLPASVS
PGEFARLRVH AEQLARLHAE ATRGTHEVRL DEIWQLLLPA LPGAPGVQDL LDAEVAVERE
LCRADLAVVE LAELAMTKLG LPVYLLSDTY FSAGQLERLL NRPELAGVPF THIFTSSDAG
TSKSDGLFQH MLAASNLRPS RVVHLGDHPV ADVEGAREHG LVAIHYPKYS GALEQTLELE
GLRKAPSDDL PIDPVDGDYG MTALRARSLH RADALAVPAG LRRYWEAGAT VFGPVFTGFA
EWAVERARDF GADHIHCLMR EGDFLSRLLV GPGEDVGVTI STLWASRQVC ALANVFEGNP
EELRSFLVRR HAPSVGQLLR QLGVRLENVA GISALADRRL DVPGLLDDTL EALCSDERIR
SEIVLTASRL RERYVRYLDS QLPESGRVVF LDLGWGGTIQ ALLTRLLAST GRGLDILGLY
LATNQAAMTH RLAGLELEGY VATSGQPETL ANQLMRSPEV LEQLCMPDVG SLVSFDEMGN
PVLSIDRTSR TQVAQRAAVQ DGVLAFQREW LRYRRSETPM PSLACAGARQ AGLRTLTRFV
ARPTAVEAAA FGAWAHDDNF GSDATEGLLP PELVRRMPYL TPADIDRISM RELYWPAGVA
GVANRPLAVI SGLAAAAGIP PEEVSPEAAA GPVEVYIDTG GDFVNGPKET AVTRSARDGL
SIVRLSLEAV GVRRIRIDPA GRRGLLRLDW LTLSFHINNT PEPDKITITS LDDPAQQLAL
LGCRLLQPNL VEITGDDPQF VYTIDLATQP QLAGVYALDV ELAFGWMGIR GDPLALPAAE
PARDGLPLRA ARKIRRELGG SR
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