Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0725 |
Symbol | |
ID | 3903515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 834953 |
End bp | 837541 |
Gene Length | 2589 bp |
Protein Length | 862 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637878058 |
Product | HAD superfamily hydrolase-like |
Protein accession | YP_479838 |
Protein GI | 86739438 |
COG category | [R] General function prediction only |
COG ID | [COG5610] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.237174 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0738114 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTCACCG ACGTCCGGCT ACGCGAAGTG TGGTCGCACC TGGAGTCGGG CGGGGCACAG GCCCTGACTC TGGATGTCTT CGACACCCTC CTGTGGCGCA TGGTGCCAGA GCCCGCCCAT GCCTTCGTGC TGTTGGGCCG GCGGCTCGCG GACGCGGGCC ACCTGCCCGC CAGCGTCTCC CCGGGCGAGT TTGCCCGGCT GCGGGTCCAC GCCGAGCAGC TGGCCCGCCT GCACGCCGAG GCCACCCGCG GTACCCATGA GGTGCGGCTG GACGAGATCT GGCAGCTGCT GCTGCCTGCG CTACCCGGTG CCCCCGGCGT CCAGGACCTC CTGGACGCAG AGGTCGCGGT CGAACGCGAG CTCTGCCGCG CCGACCTCGC CGTGGTGGAG CTCGCCGAGC TCGCCATGAC GAAGCTCGGC CTGCCGGTCT ACCTGCTGTC CGACACGTAC TTCTCGGCCG GCCAGCTCGA ACGGCTGCTG AACCGGCCGG AGCTGGCCGG CGTGCCCTTC ACCCACATCT TCACCTCCTC CGACGCAGGG ACGTCGAAGA GTGACGGGCT GTTCCAGCAC ATGCTCGCAG CGTCGAACCT GCGGCCGTCC CGGGTCGTGC ACCTTGGCGA CCACCCCGTC GCCGACGTCG AGGGCGCCCG CGAGCACGGG CTTGTCGCCA TCCATTACCC GAAGTACTCC GGGGCGCTGG AGCAGACCCT TGAGCTCGAG GGTCTGCGTA AGGCGCCGAG CGACGACCTC CCGATCGACC CGGTAGACGG CGACTACGGG ATGACCGCGT TGCGAGCCCG GTCACTGCAC CGTGCCGACG CCCTCGCGGT CCCCGCGGGG CTGCGCCGGT ACTGGGAGGC CGGCGCGACG GTCTTCGGGC CGGTCTTCAC CGGTTTCGCG GAGTGGGCTG TGGAACGGGC CCGTGACTTC GGCGCCGACC ACATCCACTG CCTGATGCGG GAGGGCGACT TCCTTTCCCG CCTGCTCGTC GGTCCCGGCG AGGATGTCGG GGTCACCATT TCGACGCTGT GGGCGTCGCG GCAGGTGTGC GCGCTGGCCA ACGTCTTCGA GGGCAACCCC GAGGAGCTCA GGAGCTTCCT GGTCCGTCGG CACGCGCCGA GTGTGGGGCA GTTGCTGCGC CAGCTCGGGG TCCGGCTGGA GAACGTCGCC GGCATCTCGG CGCTGGCCGA CCGCCGCCTC GACGTGCCCG GCCTGCTCGA CGACACCCTC GAGGCGCTCT GTTCCGATGA GCGGATCCGC AGCGAGATCG TGCTGACCGC GTCCCGCCTG CGTGAGCGTT ACGTGCGCTA CCTCGACAGC CAGCTACCCG AGAGCGGCCG GGTCGTCTTC CTCGACCTGG GCTGGGGCGG GACGATCCAG GCGCTGCTCA CCCGGCTGCT CGCCTCCACC GGCCGCGGGC TGGACATCCT CGGCCTGTAC CTGGCTACGA ACCAGGCGGC GATGACGCAC CGGTTGGCCG GTCTGGAGCT GGAGGGATAT GTTGCGACAA GCGGTCAGCC CGAGACCCTG GCGAACCAGC TCATGCGTAG CCCCGAGGTA CTCGAGCAGC TTTGCATGCC CGACGTCGGG TCACTGGTCT CCTTCGACGA GATGGGTAAT CCGGTGCTCA GCATCGACCG GACCTCGCGG ACGCAGGTCG CCCAGCGAGC CGCCGTCCAG GACGGCGTCC TGGCCTTCCA GCGGGAATGG CTGCGTTACC GGCGCTCGGA GACCCCGATG CCGTCGCTGG CCTGCGCCGG GGCGCGCCAG GCGGGGCTGC GGACGCTGAC CCGCTTCGTC GCCCGGCCGA CCGCGGTGGA GGCCGCGGCC TTCGGTGCCT GGGCGCACGA CGACAACTTC GGCTCCGACG CCACCGAGGG CCTGCTGCCG CCGGAGCTGG TCCGCCGGAT GCCGTATCTC ACCCCGGCCG ACATCGACCG GATCTCCATG CGCGAGCTTT ACTGGCCCGC CGGGGTGGCC GGGGTCGCGA ACCGGCCGCT GGCCGTGATC AGCGGGCTGG CCGCCGCCGC GGGCATCCCG CCGGAGGAGG TCTCGCCCGA GGCCGCGGCG GGGCCCGTGG AGGTCTACAT CGACACGGGC GGGGACTTCG TCAACGGTCC GAAGGAGACG GCGGTCACCC GGTCGGCCCG CGACGGCCTG TCGATCGTCC GGCTCAGCCT GGAGGCGGTC GGGGTACGCC GGATCCGCAT CGACCCGGCG GGTCGGCGCG GTCTGCTCCG CCTGGACTGG CTGACGCTGT CCTTTCATAT CAACAACACC CCAGAGCCGG ACAAGATAAC CATCACCTCG CTGGACGATC CCGCCCAGCA GCTCGCCCTC CTCGGCTGCC GGCTGCTCCA GCCGAACCTG GTAGAGATCA CCGGGGACGA CCCACAGTTC GTCTACACGA TCGACCTCGC CACACAGCCG CAGCTCGCCG GGGTCTACGC CCTCGACGTC GAGCTGGCGT TCGGCTGGAT GGGCATCCGG GGTGATCCGC TGGCCCTGCC CGCGGCGGAG CCCGCCCGCG ACGGTCTGCC GCTGCGGGCG GCCCGCAAGA TCCGGCGCGA GCTCGGGGGA TCGCGGTGA
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Protein sequence | MFTDVRLREV WSHLESGGAQ ALTLDVFDTL LWRMVPEPAH AFVLLGRRLA DAGHLPASVS PGEFARLRVH AEQLARLHAE ATRGTHEVRL DEIWQLLLPA LPGAPGVQDL LDAEVAVERE LCRADLAVVE LAELAMTKLG LPVYLLSDTY FSAGQLERLL NRPELAGVPF THIFTSSDAG TSKSDGLFQH MLAASNLRPS RVVHLGDHPV ADVEGAREHG LVAIHYPKYS GALEQTLELE GLRKAPSDDL PIDPVDGDYG MTALRARSLH RADALAVPAG LRRYWEAGAT VFGPVFTGFA EWAVERARDF GADHIHCLMR EGDFLSRLLV GPGEDVGVTI STLWASRQVC ALANVFEGNP EELRSFLVRR HAPSVGQLLR QLGVRLENVA GISALADRRL DVPGLLDDTL EALCSDERIR SEIVLTASRL RERYVRYLDS QLPESGRVVF LDLGWGGTIQ ALLTRLLAST GRGLDILGLY LATNQAAMTH RLAGLELEGY VATSGQPETL ANQLMRSPEV LEQLCMPDVG SLVSFDEMGN PVLSIDRTSR TQVAQRAAVQ DGVLAFQREW LRYRRSETPM PSLACAGARQ AGLRTLTRFV ARPTAVEAAA FGAWAHDDNF GSDATEGLLP PELVRRMPYL TPADIDRISM RELYWPAGVA GVANRPLAVI SGLAAAAGIP PEEVSPEAAA GPVEVYIDTG GDFVNGPKET AVTRSARDGL SIVRLSLEAV GVRRIRIDPA GRRGLLRLDW LTLSFHINNT PEPDKITITS LDDPAQQLAL LGCRLLQPNL VEITGDDPQF VYTIDLATQP QLAGVYALDV ELAFGWMGIR GDPLALPAAE PARDGLPLRA ARKIRRELGG SR
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