Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0720 |
Symbol | |
ID | 3903510 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 827812 |
End bp | 829038 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 637878053 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_479833 |
Protein GI | 86739433 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.450212 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGGTCG TGCTGGACGG CACGCCGTTG CTCGGGCAAC GCACCGGGGT CGGCCGCTAC ACCGAGCATC TGCTGACCGG GCTCGCCCGG CTCGCCACCG AGCCCGGGCG GGAAGCCGGG GCCGGGTGGG AACTCGCGGC GACGGCGTTC ACCTGGCGCG GGCTGGACGA GCTGCCGGGC GCGCTGCCGG CCGGGGTGCG AACGGCGGCC CGGCGGGCAC CGGCCCGGCT GTTGCAGGAT GCCTGGGCCC GCTCGGAGTA CCCGCCCGTC GAGTGGCTCA CCGGCCCCGC CGACGTCGTG CACGCGACGA ACTTCGTCCT TCCACCGCTG CGCCGGGCCC GCGGTGTGCT GACCATCCAT GACCTGTCCT ACCTGCGTAC CCCGGACACG GTGACGGCGG CGTCCGCCCG CTACAGCGAT CTGGTCCCCC GCGGCCTGCG CCGGGCGTCC GCCGTGCTGA CGCCCAGCCG CGCGGTGGCC GACGAGGTGG TGACGGCCTA CCGGCTCGAC CCCGCGCTGG TGACCCCGAC GCCGCTCGGC GTCGACGACG CCTGGTTCAC CACGGCGAAG CCGAGCCTCG CCTGGCGCAG GGCCCGTGGC CTGCCCGAGC GGTACCTGCT GTTCGTCGGT TCGGTGGAGC CCCGCAAGAA CCTCCCGGCG CTGCTGGAGG CGGTCCGCCG GCTGCACGCG GCGAAAATCG ACGCTCCGCC GTTGGTGCTC GTCGGGCCTC CGGGGTGGGG ACCGGCACTG GACCTGGCGA ACCTGCCGTC CGACGCCGTC GTCGTCGCCG GTTATCTCGA CAGCGAGGCA CTGCGGATGA CCGTCGCCGG AGCGAGCGTG CTGTGCTTCC CGTCCCGGTA CGAGGGCTTC GGGCTACCCC CCCTGGAGGC GCTCGCCGCC GGGACTCCGG TGGTCGCCGC CGACATCCCG ACCGTGCGGG AGGTCACCGC CGCTCTCGTC GACGTCGCCG CCCCCGCCTG CCGGTCCCCT GAGCAGACCC CTGGCCAGGC CCCCGGGCTG ACCATCACCC GCTCCACCAG TCCGGTGCGG CTCGTTCGGC AGACCGACCG CGACTCGTTC GCCGACGACC TCGCCGAAGC GATCCTGGAG CTGCTCGACT CCCCCGGCGA CACCGACGCC GGCCGGGCGC ACGCCCGCAC GTTCACCTGG CGGCGCACCG CGCAGCTCAC CGCGGCCGTC TACCGCCGGG TCAGCGAGCT TCCATAA
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Protein sequence | MRVVLDGTPL LGQRTGVGRY TEHLLTGLAR LATEPGREAG AGWELAATAF TWRGLDELPG ALPAGVRTAA RRAPARLLQD AWARSEYPPV EWLTGPADVV HATNFVLPPL RRARGVLTIH DLSYLRTPDT VTAASARYSD LVPRGLRRAS AVLTPSRAVA DEVVTAYRLD PALVTPTPLG VDDAWFTTAK PSLAWRRARG LPERYLLFVG SVEPRKNLPA LLEAVRRLHA AKIDAPPLVL VGPPGWGPAL DLANLPSDAV VVAGYLDSEA LRMTVAGASV LCFPSRYEGF GLPPLEALAA GTPVVAADIP TVREVTAALV DVAAPACRSP EQTPGQAPGL TITRSTSPVR LVRQTDRDSF ADDLAEAILE LLDSPGDTDA GRAHARTFTW RRTAQLTAAV YRRVSELP
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