Gene Francci3_0720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0720 
Symbol 
ID3903510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp827812 
End bp829038 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content75% 
IMG OID637878053 
Productglycosyl transferase, group 1 
Protein accessionYP_479833 
Protein GI86739433 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.450212 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGTCG TGCTGGACGG CACGCCGTTG CTCGGGCAAC GCACCGGGGT CGGCCGCTAC 
ACCGAGCATC TGCTGACCGG GCTCGCCCGG CTCGCCACCG AGCCCGGGCG GGAAGCCGGG
GCCGGGTGGG AACTCGCGGC GACGGCGTTC ACCTGGCGCG GGCTGGACGA GCTGCCGGGC
GCGCTGCCGG CCGGGGTGCG AACGGCGGCC CGGCGGGCAC CGGCCCGGCT GTTGCAGGAT
GCCTGGGCCC GCTCGGAGTA CCCGCCCGTC GAGTGGCTCA CCGGCCCCGC CGACGTCGTG
CACGCGACGA ACTTCGTCCT TCCACCGCTG CGCCGGGCCC GCGGTGTGCT GACCATCCAT
GACCTGTCCT ACCTGCGTAC CCCGGACACG GTGACGGCGG CGTCCGCCCG CTACAGCGAT
CTGGTCCCCC GCGGCCTGCG CCGGGCGTCC GCCGTGCTGA CGCCCAGCCG CGCGGTGGCC
GACGAGGTGG TGACGGCCTA CCGGCTCGAC CCCGCGCTGG TGACCCCGAC GCCGCTCGGC
GTCGACGACG CCTGGTTCAC CACGGCGAAG CCGAGCCTCG CCTGGCGCAG GGCCCGTGGC
CTGCCCGAGC GGTACCTGCT GTTCGTCGGT TCGGTGGAGC CCCGCAAGAA CCTCCCGGCG
CTGCTGGAGG CGGTCCGCCG GCTGCACGCG GCGAAAATCG ACGCTCCGCC GTTGGTGCTC
GTCGGGCCTC CGGGGTGGGG ACCGGCACTG GACCTGGCGA ACCTGCCGTC CGACGCCGTC
GTCGTCGCCG GTTATCTCGA CAGCGAGGCA CTGCGGATGA CCGTCGCCGG AGCGAGCGTG
CTGTGCTTCC CGTCCCGGTA CGAGGGCTTC GGGCTACCCC CCCTGGAGGC GCTCGCCGCC
GGGACTCCGG TGGTCGCCGC CGACATCCCG ACCGTGCGGG AGGTCACCGC CGCTCTCGTC
GACGTCGCCG CCCCCGCCTG CCGGTCCCCT GAGCAGACCC CTGGCCAGGC CCCCGGGCTG
ACCATCACCC GCTCCACCAG TCCGGTGCGG CTCGTTCGGC AGACCGACCG CGACTCGTTC
GCCGACGACC TCGCCGAAGC GATCCTGGAG CTGCTCGACT CCCCCGGCGA CACCGACGCC
GGCCGGGCGC ACGCCCGCAC GTTCACCTGG CGGCGCACCG CGCAGCTCAC CGCGGCCGTC
TACCGCCGGG TCAGCGAGCT TCCATAA
 
Protein sequence
MRVVLDGTPL LGQRTGVGRY TEHLLTGLAR LATEPGREAG AGWELAATAF TWRGLDELPG 
ALPAGVRTAA RRAPARLLQD AWARSEYPPV EWLTGPADVV HATNFVLPPL RRARGVLTIH
DLSYLRTPDT VTAASARYSD LVPRGLRRAS AVLTPSRAVA DEVVTAYRLD PALVTPTPLG
VDDAWFTTAK PSLAWRRARG LPERYLLFVG SVEPRKNLPA LLEAVRRLHA AKIDAPPLVL
VGPPGWGPAL DLANLPSDAV VVAGYLDSEA LRMTVAGASV LCFPSRYEGF GLPPLEALAA
GTPVVAADIP TVREVTAALV DVAAPACRSP EQTPGQAPGL TITRSTSPVR LVRQTDRDSF
ADDLAEAILE LLDSPGDTDA GRAHARTFTW RRTAQLTAAV YRRVSELP