Gene Francci3_0710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0710 
Symbol 
ID3903500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp812707 
End bp813612 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content75% 
IMG OID637878043 
Producthypothetical protein 
Protein accessionYP_479823 
Protein GI86739423 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID[TIGR03089] conserved hypothetical protein TIGR03089 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.668983 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCT CCGTGCCGCG GCTGGTCGCC GCACGGACGC TGCTTGGCCC GGCCGCGGAC 
GCCGACGCCG CACCCGCGGC GGGGGTTCGC GGCATCGCGT CCGTCCTCGC GCACCGGCTG
GCCACCGATC CCGCCCGCCC GCTGGTCACC TTCTACGACG ACGCGACCGG CGAACGCGTG
GAATTCTCGG CGACCACCTT CGACAACTGG GTGGCGAAGA CCGCGAACAT GCTGGTCGAC
ACGCTCGGCC TCGGCATCGG TGACCGGGTC GGCGTCCACC TGCCGACGCA CTGGCTCAGT
TCGGTCATCC TGCTCGCCAC CTGGTCGGCC GGGATGGACG CGGTCCTCGT CCGGGACGCA
GCCGGCGAGC AGGACGGCGG GGACGCCGAG AAGGCCGGCG GGGAGCTCCC GGTCGCGACC
CCCCTCGACG CGCTGTTCGT GGCCGAGGAC CGGCTCGACG AGGCATTCGG CCTGATGGTG
GACGAGATCG TGGCCCTGTC ACTGCGCCCG CTGGGTGGTC GGATGCGCAG GCCCGTCGCC
GGGGTTCTCG ACTACGCCGC GGAGGTGCCC CCGCACGGCG ATCGGTTCGC CGCCCCGGCA
GCGCCGCCTG GGCAGGCCGC GCTGCTGCGC GCGGGTACCG CGATCGCGGG GGCGTGGGGC
CTGGGACCCG CGGACCGGGT GCTGTTCACC GCGCCGCTCG CCACGACCGA GGGCCTGGTC
GGTTCGCTGC TTGCTCCCCT GGTCGCAGGC TCGTCGATCG TGCTGTGCCG GCATCTCGAC
AGCGCCGCGC TCCCGCGGCG CATCGAGACG GAGAAAATCA CCGCCGTCGG CCGGTCAGTC
CTGCGGCACG CGCCCAGCCC ACTGCCCGCG GGGGTCCGGT CGCTGCCGCT CCCCCGCCTC
GGGTGA
 
Protein sequence
MSASVPRLVA ARTLLGPAAD ADAAPAAGVR GIASVLAHRL ATDPARPLVT FYDDATGERV 
EFSATTFDNW VAKTANMLVD TLGLGIGDRV GVHLPTHWLS SVILLATWSA GMDAVLVRDA
AGEQDGGDAE KAGGELPVAT PLDALFVAED RLDEAFGLMV DEIVALSLRP LGGRMRRPVA
GVLDYAAEVP PHGDRFAAPA APPGQAALLR AGTAIAGAWG LGPADRVLFT APLATTEGLV
GSLLAPLVAG SSIVLCRHLD SAALPRRIET EKITAVGRSV LRHAPSPLPA GVRSLPLPRL
G