Gene Francci3_0701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0701 
Symbol 
ID3906251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp802798 
End bp803730 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content71% 
IMG OID637878034 
Productbiotin--acetyl-CoA-carboxylase ligase 
Protein accessionYP_479814 
Protein GI86739414 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0340] Biotin-(acetyl-CoA carboxylase) ligase 
TIGRFAM ID[TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.476983 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCACCCT CGAAGGAGCC CGCACCCGCG GGACCCTCTC CCGAGCAGCC CGCGTCCGGC 
AAGCTCCCGT CCGGCAAGCC CTCGCCGGCG TCCCCTCGGG CCCGCCCTGC CGGAGAGGGG
CGATTCTCGT CCGTCGGAAC ACGTGAACCG CTGGACGCCG CACGCCTCGC GGCCCGTGCC
GCCGCGGTCG GTCTCGACCT GACGGTGGTA GAGGAGACCG ACTCGACCAA CGCCGCGCTG
GCGCGCATCG CCCGGGGCGA AGACACCGCC CGGGGCGAAG ACACCGCCCG CGGCCGGGGA
CGGGTTCTCG TCGCCGAACG GCAGACGGCG GGTCGTGGTC GGCTCGACCG ATCATGGGAG
TCTCGCCCTG GTGCCGGGTT GACGGTCTCG CTGCTGCTGC AACCCCGGCT ACCGATGTCA
CTGTTCGGCT GGCTGCCCAT GGTGGTCGGA ACCTCGCTTC TGGCGACGCT ACGCGAGGTG
GCGGCGGTTC CCGCAGTCCT GAAATGGCCC AATGACGTTC TCGTTGACGA TGCGAAGCTC
GCCGGCATCC TGGTCGAGGT CGTCCAGGTC CCACTATCGT CACCCTCGGT GATTATCGGT
TTTGGGTTGA ATGTCATGGC GGAGCGTGAC GAGCTCCCGG AGCGGTCGAC AAGCCTGCTG
CTCAGCGGCG CGCTTCCGGC GGCTCTGGAC CGGACCGAGC TGCTCGGGGT GGTACTCGCG
GATCTCGTCG GGGCGATCAC TGGCTGGGAG GCCGACCCGC AAGCGGCTCG CGCGGAGTAC
CTACGGGTGT GCGCGACGAT CGGCAGGCGG GTGCGCGTCG AGCTGCCGGA CGGTTCGGCG
GTGCTCGGGA CCGCCACCGA CGTTGACCCC GACGGCCGGC TCGTCGTCAA CGGGCGACCC
TACAGCGCCG CCGACATCGT TCACCTGCGG TGA
 
Protein sequence
MPPSKEPAPA GPSPEQPASG KLPSGKPSPA SPRARPAGEG RFSSVGTREP LDAARLAARA 
AAVGLDLTVV EETDSTNAAL ARIARGEDTA RGEDTARGRG RVLVAERQTA GRGRLDRSWE
SRPGAGLTVS LLLQPRLPMS LFGWLPMVVG TSLLATLREV AAVPAVLKWP NDVLVDDAKL
AGILVEVVQV PLSSPSVIIG FGLNVMAERD ELPERSTSLL LSGALPAALD RTELLGVVLA
DLVGAITGWE ADPQAARAEY LRVCATIGRR VRVELPDGSA VLGTATDVDP DGRLVVNGRP
YSAADIVHLR