Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0698 |
Symbol | |
ID | 3906248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 798750 |
End bp | 800507 |
Gene Length | 1758 bp |
Protein Length | 585 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637878031 |
Product | carbamoyl-phosphate synthase L chain, ATP-binding |
Protein accession | YP_479811 |
Protein GI | 86739411 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.933214 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGTAAGA TCCTCATCGC CAATCGGGGA GAAATCGCGG TTCGAGTGGC CCGCGCCTGC CGCGACGCCG GATACACCAG CGTCGCAGTC TACGCGGAAC CAGATATCAA TGCCCTGCAC GTACGCGTTG CTGACGAGGC ATTTGCGTTG GGAGGCGCGA CCCCTGGTGA TTCGTACCTG CGCATCGACA AAATTCTCGA TGCCTGCGAG TCCTCCGGGG CCGACGCCGT CCACCCGGGA TACGGTTTTC TCTCGGAGAA TGCGGACTTC GCGGAGGCCG TGATCTCCGC AGGCCTCACC TGGATCGGCC CGCCGCCGGA GGCCATCCGC CGTCTCGGAG ACAAGACCGC GGCCCGGCAT ATTGCACTAG CGGTCGGCGC GCCGCTCGCG CCCGGCACCG CAGACCCCGT GGCCGGCGTC GATGAGGTTG TCACCTTCGC CGGGCAGTAC GGCCTTCCGG TTGCCATCAA GGCCGCTTTT GGTGGCGGAG GGCGCGGACT GAAGGTCGCT TGGACCGCGG AGGAGCTCCC CGAACTGTTT GACAGTGCCG TCCGGGAGGC GGTCGCGGCG TTCGGTCGCG GGGAATGCTT CGTCGAGCGG TATCTGGACC AGCCGCGCCA CGTCGAGACC CAGATCCTGG CGGATACGCA CGGCAACGTC GTCGTGGTCG GTACCCGCGA CTGCTCACTC CAGCGCCGTT ACCAGAAGCT CGTGGAGGAG GCGCCGGCAC CGTTTCTCTC GGAGGCTCAG CTCCACTCGC TGTACGACGC CTCGAGGGCG ATCTGCAAGA AAGCCGGCTA TGTCGGGGCC GGGACCGTCG AGTTCCTCGT CGCCCGCGAT GGCATGATCA GCTTCCTTGA AGTCAACACC CGCCTCCAGG TCGAGCATCC GGTGACCGAA GAGGTCTCCG GAGTGGACCT GGTTCGTGCC CAGTTCCGTA TCGCCGAGGG TGAGGCACTC GACTTCACCG ATCCGGCTCC TCGCGGTCAC TCCATCGAAT TCCGCATCAA CGGTGAGGAT CCCGGCCGTA ACTTCCTTCC CGCACCCGGC ACGGTCACCA AGCTGATCGC GCCGGCCGGC CCCGGCGTCC GGCTCGATAC CGGCATCGAA AGCGGCAGCG TCATCGGCGG CGCCTTCGAC TCCCTGCTCG CAAAGCTCAT CATCACCGGA GCAACCCGGC AGGAAGCTCT GCAGCGGGCT CGGCGTGCCC TCGATGAGAT GGTCATCGAG GGAATGGCGA CGGCGCTGCC GTTCCACCGC GCGGTCGTAC GGGATCCCGC CTTCGCCCCG GAGGACGCCG CAGAGCCTTT CCGTATCCAC AACCGCTGGA TCGAAACCGA GTTCGACAAC ACCATCCCGG CCTTCGCGGG AGGGACTGAG GCCGACACCA CCCCCGAGCC GCGGGAGACC GTGGTTGTCG AGGTGAGCGG CAAACGCCTC GAAGTCGTGC TACCCGCCGG ATTCGGTTCT GCCCCCGTCG CCGCTTCCCG GGGAGCGGCG CCCAAGCGGC GCGCTCGCGG CACGGCGGCG GCCAGGGTCA CGGGCGACGC CCTGGCCAGT CCCATGCAGG GCACCATCGT GAAGGTCGCG GTCAACGACG GCGACACCGT TTCCGCGGGT GATCTGATCA TTGTTCTGGA AGCGATGAAG ATGGAACAGC CGATCAACGC GCATCGGGAT GGCACGGTCA CCGGACTGGC TGCGACCGTC GGCGCCGTTG TCACCAGCGG CACCGTGCTC TGTGAGATCA AAGACTAG
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Protein sequence | MRKILIANRG EIAVRVARAC RDAGYTSVAV YAEPDINALH VRVADEAFAL GGATPGDSYL RIDKILDACE SSGADAVHPG YGFLSENADF AEAVISAGLT WIGPPPEAIR RLGDKTAARH IALAVGAPLA PGTADPVAGV DEVVTFAGQY GLPVAIKAAF GGGGRGLKVA WTAEELPELF DSAVREAVAA FGRGECFVER YLDQPRHVET QILADTHGNV VVVGTRDCSL QRRYQKLVEE APAPFLSEAQ LHSLYDASRA ICKKAGYVGA GTVEFLVARD GMISFLEVNT RLQVEHPVTE EVSGVDLVRA QFRIAEGEAL DFTDPAPRGH SIEFRINGED PGRNFLPAPG TVTKLIAPAG PGVRLDTGIE SGSVIGGAFD SLLAKLIITG ATRQEALQRA RRALDEMVIE GMATALPFHR AVVRDPAFAP EDAAEPFRIH NRWIETEFDN TIPAFAGGTE ADTTPEPRET VVVEVSGKRL EVVLPAGFGS APVAASRGAA PKRRARGTAA ARVTGDALAS PMQGTIVKVA VNDGDTVSAG DLIIVLEAMK MEQPINAHRD GTVTGLAATV GAVVTSGTVL CEIKD
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