| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0689 |
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| Symbol | upp |
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| ID | 3906239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 787265 |
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| End bp | 787903 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637878022 |
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| Product | uracil phosphoribosyltransferase |
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| Protein accession | YP_479802 |
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| Protein GI | 86739402 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0035] Uracil phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.338989 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCAGCTGC ACATCGTCGA CCATCCCCTC GCGGCCTCGT CGCTGACCGT CCTGCGGGAC
GAGCGCACGC CTCGGTCCCG GTTCCGGCCC GTCCTGTACG ACCTGGCGAT GATGCTCGTG
TACGAGGCGA CCCGTACGCT GCCGACGATG CCGGTCGCCG TCACGACTCC GCTGGCCACG
ACCTCCGGGG TGCGGCTGGC CGCGGAGCCG GTCGTCGTCC CGGTGCTGCG GGCCGGGCTC
GGCATGCTGC CGGCGGCGCT CAACCTGCTT CCCGACGCCC ACACCGCGTT CATCGGGCTC
TCCCGCGACG AGACGACCTT CGAACCCACG GTCTACCTGG AGGCGGTGCC CAGCGATCTG
GCCGGCCGCC CGGTGCTGCT GCTCGACCCG ATGCTCGCCA CCGGCGGTTC GGCCCTGCAC
TGTCTGCGGC TGCTCGCCGA CCGCGGGGCG CGGGGCGTCA CCGTGGTCTC CGTGGTGGCA
GCACCGGAGG GCCTTGCGGC GCTGGAATCC GGTGGCCCTG CGGTCGGCAC GGCGGACCTG
ACCGTTGTGA CCGCCGTGGT CGACGAGAGA TTGAACGAGA CGGCCTATAT TGTGCCCGGG
CTCGGCGACG CGGGTGATCG GATCTTCGGC GAGATGTGA
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| Protein sequence | MQLHIVDHPL AASSLTVLRD ERTPRSRFRP VLYDLAMMLV YEATRTLPTM PVAVTTPLAT
TSGVRLAAEP VVVPVLRAGL GMLPAALNLL PDAHTAFIGL SRDETTFEPT VYLEAVPSDL
AGRPVLLLDP MLATGGSALH CLRLLADRGA RGVTVVSVVA APEGLAALES GGPAVGTADL
TVVTAVVDER LNETAYIVPG LGDAGDRIFG EM
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