| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0685 |
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| Symbol | deoA |
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| ID | 3905273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 783059 |
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| End bp | 784363 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637878018 |
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| Product | thymidine phosphorylase |
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| Protein accession | YP_479798 |
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| Protein GI | 86739398 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0366488 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGGAA GCTTCGACGT CGTCGATCTG ATCCGGGCCA AGCGGGACGG TCGACCCGTC
GATCCCCGGG CCGTCGACTG GCTCGTCGAC GCCTACACCC GGGGTCTGGT TGCCGACGAG
CAGATGTCGG CGTACCTGAT GGCGGTGGTG TGGCGCGGGA TGACTCCCGC CGAGCTGGAC
CGCTGGACCG CCGCAATGAT CGACAGTGGG GAGCGCCTGG ATCTGACCGG TGTGGGACGT
CCCACCGTCG ACAAACACTC CACCGGAGGG GTCGGCGACA AGGTCTCGCT CGTGCTGGTG
CCGCTGGTCG CCGCCTGTGG GGCCGCGGTC CCACAGCTCG CCGGGCGGGG GCTCGGTCAC
ACCGGTGGAA CGCTGGACAA GATGGAGGCG ATCCCCGGCT GGCGGGCGGA TCTGTCGGCC
GCCCGGATGC GTGAGCTCCT CGCCGAGGTG GGTGCGGTGA TCGCCGCCGC GGGTGCCGGC
CTCGCCCCGG CCGACCGCCG GCTCTACGCG CTGCGGGACG TCACCGGAAC CGTCGAGTCG
ATCCCGCTCA TCGCATCGTC GATCATGAGC AAGAAGATCG CCGAGGGCAC GTCGGCGCTG
GTCCTGGACG TCAAGGTCGG CTCCGGGGCC TTCATGACGT CGGTGGATGA GGCCCGTGAG
CTCGCCCGGA CGATGGTTCG GATCGGCGTT GCCGCCGGGG TCCGCACCGA GGCCCTGCTG
ACCGGGATGG ACCATCCCCT CGGCCGGACC GCCGGGCATG CGCTGGAGGT GGCCGAGGCC
GTGGAGACCC TCCGTGGTGG TGGGCCGGCG GATCTGGTGG AGGTCACCGT CGCGCTGGCC
AGGGTGATGA TCGACCTCGT CGCCGCCGAA CTCGGCCACC GGTCCGGTGC TCTTCATGAT
CCCGCGCAGG TACTGGCTGC CGGGGACGCT TTTGCGGTGT GGCGGGCGAT GGTCGCGGCC
CAGGGCGGCG ATCCGGACGC GCCGCTTCCG GCGGCGAGCC ATGTCGAGAC CGTCCCCGCG
CCGGCGACCG GCCATCTCCA CCGCCTGGAC GCCCGAGCGG TCGGCCTGGC GGCCTGGCGG
CTTGGCGCGG GCCGGGTCCG CAAGGAGGAC GCGGTCTCCG CGACGGCGGG CGTGCGGTGG
CGGGTGGGAA TCGGTGACCC GGTCACGGCC GGCGAGCCGT TGCTGGAACT GCACACCGAT
GACCCGGCCA GCGTCGAGCG GGCCCGGGAG GCCCTGGCGG GAGCGGTGGA GGTCGCCGCG
ACGCCGCCCC CGAGCACACC GCTTGTCCTC GATCACATCA GCTGA
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| Protein sequence | MSGSFDVVDL IRAKRDGRPV DPRAVDWLVD AYTRGLVADE QMSAYLMAVV WRGMTPAELD
RWTAAMIDSG ERLDLTGVGR PTVDKHSTGG VGDKVSLVLV PLVAACGAAV PQLAGRGLGH
TGGTLDKMEA IPGWRADLSA ARMRELLAEV GAVIAAAGAG LAPADRRLYA LRDVTGTVES
IPLIASSIMS KKIAEGTSAL VLDVKVGSGA FMTSVDEARE LARTMVRIGV AAGVRTEALL
TGMDHPLGRT AGHALEVAEA VETLRGGGPA DLVEVTVALA RVMIDLVAAE LGHRSGALHD
PAQVLAAGDA FAVWRAMVAA QGGDPDAPLP AASHVETVPA PATGHLHRLD ARAVGLAAWR
LGAGRVRKED AVSATAGVRW RVGIGDPVTA GEPLLELHTD DPASVERARE ALAGAVEVAA
TPPPSTPLVL DHIS
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