| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0665 |
|---|
| Symbol | |
|---|
| ID | 3902999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 761569 |
|---|
| End bp | 762615 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637877998 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_479778 |
|---|
| Protein GI | 86739378 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4420] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.965403 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.040245 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATCT CAACATCGCG GACCGCGGGA CGTCGTCGTG CCTGCACCGA GCGTCTCGAC
CTGCCCGCCT CCGGCCGGGT CACACTGATC CCCCGGGGCA TGGACCGGGA ATCGGTCAGT
CGCTTCGCGG AGGCCATCGC CCGTTTCCTG GGAACCGGGC GCTACCTCGC CATTCAGACC
TGTATCGTGA TCGTCTGGAT AGCCTTGAAC ATCGCGCTAC CGCTGCTGCG GTGGGATCCC
TACCCTTTCA TCCTGCTGAA CCTGGCCTTC TCGACCCAGG CCGCCTACGC GGCACCGTTG
ATCCTGCTCG CCCAGAACCG ACAGGACGAC CGTGACCGTG CCTCGCTGGC CGAGGATCGG
GCGGTCGCTG TACGTATGCG GGAAGACACC GAGTTTCTCG CGCGTGAGAT CGCCGCGCTC
CGGCTTGCCC AGAGCGATGC GGCGACCCGG CAGTACATGC GCGGCGAGCT GGCCGGCCAA
CTCGAATCTC TTCGCGGCGA CATCGAGAGT CTGGTGCGGG ACGCGGTTCG CGTTCCGCCC
CAGACGGCGT CGGATGAACG GGAGCCGACC GCCGCACGAT CGCCGTCACG GCACGGCGGG
CCGACGCCCA CCCCCGGTGG TGCCCCCCGG GAAACGAGCG ACCCCGAGAC CGAGGGCCCA
CCCGCCACGG GCAAGCCGAA CATCGGGAAC CCGGAACGCC CCCGGCGGCC CAAGCACCAC
AAGCGCAGGA ACACCACGGG TGTGAGCACG ACCGGCATCC CCCCTCACTC CACGGACGCC
GGGTATGCCA CCCGCACCGG GAACCGCGAA AACGGCGGTC CCGACAGGAA AACGACGCCG
ACCATCGCCA CCGGTCCCAC CCCGAAGACC ACGCTCGACG ACCCCACCCG GGAGGCCGGC
GCGACGACGC ACCTCAAGAA CAGAGGAGTT ACAACGCACG GGCACCATAG TCTCTCTGCC
CATACGGGCT CCTCCTGGCA TTCATTGGGA AAGCCGCAAC CAGTGGATTC CTACCCAGGA
AACGTCCACT CGCGACACGG GTCGTAA
|
|---|
| Protein sequence | MSISTSRTAG RRRACTERLD LPASGRVTLI PRGMDRESVS RFAEAIARFL GTGRYLAIQT
CIVIVWIALN IALPLLRWDP YPFILLNLAF STQAAYAAPL ILLAQNRQDD RDRASLAEDR
AVAVRMREDT EFLAREIAAL RLAQSDAATR QYMRGELAGQ LESLRGDIES LVRDAVRVPP
QTASDEREPT AARSPSRHGG PTPTPGGAPR ETSDPETEGP PATGKPNIGN PERPRRPKHH
KRRNTTGVST TGIPPHSTDA GYATRTGNRE NGGPDRKTTP TIATGPTPKT TLDDPTREAG
ATTHLKNRGV TTHGHHSLSA HTGSSWHSLG KPQPVDSYPG NVHSRHGS
|
|---|
| |