| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0663 |
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| Symbol | |
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| ID | 3902997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 758876 |
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| End bp | 760111 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637877996 |
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| Product | ribonuclease BN |
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| Protein accession | YP_479776 |
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| Protein GI | 86739376 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1295] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN)
[TIGR00766] ribonuclease, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.362248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0877902 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGGGAC CTCGTCAGGC GGTACGGGCC GGTGTCGGGA CGGTTTCCGG TACCGCTGTG
GCGGTACGCC GGAAACGTCC GTTTCTCGAT CACCTCGTCC GGGCATATTC CCGCTACACA
GCCGATGGCG GTGATCGTCT CGCGGCGTCG GCGACCTACT TCGCGTTCCT GTCATTCTTC
CCGCTGATCG CGCTGGCCTT CGCGGTCACC GGCTTCGTCG TAGACGCGTA CCCCGATGTG
CAGGAGAGCC TGACCCGGCA GATCAACGAC TATCTTCCGG GCCTGGCGGA CAAGCTCGAC
GTCGCCTCGA TTGGCAACGC CAAGGTCGGT GTGGGCATTA TCGGTCTTGC CGGCCTCCTG
CTCGCCGGAC TCGCGTGGAT CGACGCGCTG CGGGACGCCA TCCGTCTCGT ATGGCACCAG
GACATCGATG TCGGCAACAT CATCACCCGG CGGCTGCGGG ATGTCACGGT GCTCGCGGGA
CTGGGGCTGA CTCTGTTGGC CTCACTCGTC GTGACCAGCC TCTCGACCTC GGCCACCGGG
TCATTCCTGA GCTGGATCGG ATTGTCCGGC AGCACCGCCG CGGCCTGGGT GACCGGCCTA
CTGGCCCTGC TTGTCGCCCT CGCGATCGAC ACCGCGGTTT TCCTCTATCT GTTCTGGCGG
CTGCCGCAGC AGACCGACCG GGTGCGGACG GTCCGGGGTG CGGTGCTCGG CGCCGTCGGA
GTCGAGATCC TCAAGATCGT CGGCACCTGG CTAGTCGGGC AAACCATGAG CAATCCGGTG
TACGGTACGT TCGCGGTGAT CGTCGGGTTG CTCATCTGGA TCAATATTGT CATGCGATGG
ACGCTGTTCG TCGCGGCCTG GACCGTGACG GCGCCCTACA ACTCCGACGT CTTCCCCTCC
GGTTCGGCAG CCCGGCATAC CGTCTCCGAG GCGGCCGACC GCGCGGCGGC GGGGAGCGCG
GGCGCGGCAG GCGCGGGATC CACGGGGCCG GAGTCCTACC GGTCGAGCGG CTCGCCGAAC
CCGGAGGCCT CCCGCCGCCT GGTGCCCGGC TCCCAGAACG GCTCGACGCC GCTCGCGCCT
GCTTCATCCG ACCCGTCGTC GGCGAAGCCA TCCTCGGCCG GACCGGTGCG GGTGGCGTCG
GAGAGCAACC CGCGTGGCAC GGTGCCCCTC CCCGCCCGGG TACGGGCATT TCTGCGCCGC
CGCATACCCT CGGGGACATC CAGCAGATCG GACTGA
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| Protein sequence | MTGPRQAVRA GVGTVSGTAV AVRRKRPFLD HLVRAYSRYT ADGGDRLAAS ATYFAFLSFF
PLIALAFAVT GFVVDAYPDV QESLTRQIND YLPGLADKLD VASIGNAKVG VGIIGLAGLL
LAGLAWIDAL RDAIRLVWHQ DIDVGNIITR RLRDVTVLAG LGLTLLASLV VTSLSTSATG
SFLSWIGLSG STAAAWVTGL LALLVALAID TAVFLYLFWR LPQQTDRVRT VRGAVLGAVG
VEILKIVGTW LVGQTMSNPV YGTFAVIVGL LIWINIVMRW TLFVAAWTVT APYNSDVFPS
GSAARHTVSE AADRAAAGSA GAAGAGSTGP ESYRSSGSPN PEASRRLVPG SQNGSTPLAP
ASSDPSSAKP SSAGPVRVAS ESNPRGTVPL PARVRAFLRR RIPSGTSSRS D
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