| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0660 |
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| Symbol | |
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| ID | 3902994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 755404 |
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| End bp | 756624 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637877993 |
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| Product | geranylgeranyl reductase |
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| Protein accession | YP_479773 |
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| Protein GI | 86739373 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
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| TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0877902 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACGAGG CTGCCGACCT GCTCTCCCGT ACGATTGACG TCCTTGTCGT CGGGGGCGGC
CCGGCCGGCA GCGCGGCGGC TCTGGGCGCC CTGCGGGAAC GCCCGGACGC ACACGTCGTC
ATCGCCGACG CCGCCGAGTT CCCCCGGGAC AAGACCTGCG GTGACGGCAT CGCCCCACAC
GGCCTGGACG TCCTGCGTGA TCTCGGCGTG ACCGATGCGG TCGCCGGGTA CCGGCCGGTG
GACCGCATGC GCCTGCGCAC CCCAGGGGGC GCCGAGGTGG CCACTCCCTC AGCCCGAGCC
AACTACGTGG TACCCAGGGA GGTCTTCGAC GCCCGTCTCG TGGCCGCCGC CCAGGCACGT
GGAGCTCAGC TGATCCGGCG GCGCGTGCGG TCCCTGGAGT TTACCGACCG GCCGCGCCTG
GACGGTCGGG GACGGGAGCC GGTCGTCGTG GTCAACGGCT CGCTCACGGC GCGGGTCGTC
ATCGGCGCGG ACGGCGCAAA CTCCGCGGTA CGCCGCGGGC TAGGGCTGCC GGGTAACCCC
CCCGGGGCAA TGGCGATCGC CGTGCGGGCC TATACCGAGG TCGCCTTCGG CGACGGCCCC
CCCGAACAGT TCATCCACAT GACCGACGAG GGTTGGCCAG CCTACGCCTG GTCGTTCCCG
ATCGGCGACG GCCGTGCGAA CATCGGCTAC GGGATGCTGC GGTCCCGGCT GGCCGGCGGG
ACGGACGGAA CGAGTGCCAA GACCGTCCTG CGTCGCACGC TCGCCCGCAT GCTGCCCGAG
ACACCGGCGC ACCCGGCCAC GCTGCGGGCC CATCATCTGC CGCTGTCGAC CCATCGCCCC
CGGCAGCCGA ACGGTCCCGT GCTGCTCGCC GGGGATGCGG CCTCCCTGAT CAACCCCCTG
ACCGGGGAGG GCATCTACTA CGCGGTGCTG TCGGGGTCGC TGGCCGGGCA TGCCGCCGTC
CGCGCGGCGC ACCCGGCCGC CGCGGGCCGG GTCTACCGAC GCGCTCTCGA CGCGGAGCTG
GGACGGCATC TGCGGCACAC GGCTCTGCTC GCCGGTCTCG CCGGGCGGCG CCGCACCCTG
ATGGACGCGG CGGTCCGGGC CGCCCGCACC CGTACCGAGC TGTACGACAT GCTCGTCGAG
ATCGGGCTGG GCCGCGGCAC CATCCCGACG AGTTCCCTGA CCCGTCTGGC GATGCGGCGC
ACCATGACCG GCCTGCGCTA A
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| Protein sequence | MDEAADLLSR TIDVLVVGGG PAGSAAALGA LRERPDAHVV IADAAEFPRD KTCGDGIAPH
GLDVLRDLGV TDAVAGYRPV DRMRLRTPGG AEVATPSARA NYVVPREVFD ARLVAAAQAR
GAQLIRRRVR SLEFTDRPRL DGRGREPVVV VNGSLTARVV IGADGANSAV RRGLGLPGNP
PGAMAIAVRA YTEVAFGDGP PEQFIHMTDE GWPAYAWSFP IGDGRANIGY GMLRSRLAGG
TDGTSAKTVL RRTLARMLPE TPAHPATLRA HHLPLSTHRP RQPNGPVLLA GDAASLINPL
TGEGIYYAVL SGSLAGHAAV RAAHPAAAGR VYRRALDAEL GRHLRHTALL AGLAGRRRTL
MDAAVRAART RTELYDMLVE IGLGRGTIPT SSLTRLAMRR TMTGLR
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