Gene Francci3_0656 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0656 
Symbol 
ID3902990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp750810 
End bp751460 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content69% 
IMG OID637877989 
Productphosphoribosylglycinamide formyltransferase 
Protein accessionYP_479769 
Protein GI86739369 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0299] Folate-dependent phosphoribosylglycinamide formyltransferase PurN 
TIGRFAM ID[TIGR00639] phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.154146 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTGCTC GTCTCGTCGT ACTCGCCTCG GGAGCGGGAA CCACCCTGCA GGCGATCCTC 
GACGCAACCG CGGACCCCGG GTTCGGCGCG GCGGTCGTGG CGGTCGGCAC CGACCGCTAC
GGCACCGGAG CGGAACGGCG GGCCCGGGCC TCGGGGGTCC CGGTGTTCAC CGTTCGTCTC
GAGGACCACC CGGACCGGGA TGCCTTCAAC GCCGCGACGG CCGGGCGGAT CGCCGAATTC
GCGCCCGATC TGTTGGTCCT GGCGGGTTAC ATGAAGATTC TCAGTGCCCG GGTGATCGGC
CGGTTCCGGA CGATCAACAC CCACCCGTCG CTGCTGCCTG CCTTTCCGGG AGCCACCGCG
GTGCGTGACG CGTTGGCCGC CGGGGTGAAG GTCAGCGGGG TGACGGTGCA CTGGGTCGAC
GAAGGCGTCG ACACCGGTCC GATCATCGCT CAGCGGGCGG TGCCGGTTGA GCCAGGCGAT
ACCGAGCAGA CACTTCATGC ACGGATCCAG AGCGTCGAGC GAGGACTGTT CGTCGCGACG
ATCGGCGGGA TCGTGCGGGC CGGGAGCGGC GACTCGACCC CGGCCGGACA TCGGCGGGGC
GAGCATGGGT CTCCCGCATC GGCAGAAGTT TGGGTACAGG AGGAATCATG A
 
Protein sequence
MSARLVVLAS GAGTTLQAIL DATADPGFGA AVVAVGTDRY GTGAERRARA SGVPVFTVRL 
EDHPDRDAFN AATAGRIAEF APDLLVLAGY MKILSARVIG RFRTINTHPS LLPAFPGATA
VRDALAAGVK VSGVTVHWVD EGVDTGPIIA QRAVPVEPGD TEQTLHARIQ SVERGLFVAT
IGGIVRAGSG DSTPAGHRRG EHGSPASAEV WVQEES