| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0648 |
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| Symbol | |
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| ID | 3902982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 739854 |
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| End bp | 740924 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637877981 |
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| Product | PGAP1-like |
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| Protein accession | YP_479761 |
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| Protein GI | 86739361 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00162479 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.67184 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGCGG ACAACATCGC CGCTCCAGGG CGGTCGGTCC TCACCGGCCT GCGCACGACC
CCGGTGAACG CCCGCGGGCT CGCCGTGGAA GCGGCCTGGA TCGCCACCCA CCTCGCCCTC
TACCCGGCGA GTGCGCTGCG CCGGCAGCGC CCGCGCGAGC ACGAGCCCTA CTCGCTGAGC
GCGCTCTCCC CGCTGCACCG CAGCCTGCTG GTCAACGCTC CCGACGCGGC AGGCACCCCG
ATCCTGCTGA TCCACGGCCT GATCGACAAC CGGTCCGTGT TCACCCGGTT GGGCCGGTCG
CTACGCCGCC GCGGTTTCCG CCGGGTGCGC ACGGTGGAGC TGCCGCTGCT CGTGCCGACG
GTGCAGGAAG CGGCGCTCCG ACTCGCCGCG TCCGTGCACG CCGCGATGAC GGACAGCGGC
AGGCAGCGCG TGCACATCGT CGCCCATTCA CTCGGCGGGC TGGTGGCCCG CTACTACGTG
CAGCAACTCG GGGGCGATCA GTACGTGGAC ACGCTGATCA CTCTCGCGAC GCCTCATTCC
GGCACCCGTC TCGCCGGGCT CGTCCCCCGG TCGGTGCCGT ACCGGCTCGT CACCCAGCTA
CGGCCGGGAT CGGCGCTCCT ACGCGAGCTC GCCGCACCCG CCCCCGGCTG CCGGACCCGG
TTCGTCGCGA TCGGCGCCGG GCTGGACAGC GTGGTGCGGC CCGCCGAGGC GGCGCTCGAC
CATCCCGATC TCGACATCGA AAATTACACC GTGCCGGGCC TCGGGCATCA TTCCCTGGCG
TTCAGCGGCA AGGTTGCCCA CCTGGTCGCG AGCTGCCTCG CCGGGGCGGC GGACCGGCCG
GGACTCTCGG GACCGTCAGA GCTTCTCGAC GGGGGCGTAC CGCAGGAGCA GGCGCTTCGT
GCCGGTGTTC TCGCCGAAAT CGATGGTCGC CTCCGCGGAG TCACCGACCC CGCCGGTGGC
GACGACAACT CCGAGACCGA AACTGTCATG CGTCACCCGG TCGCCCTGAC GCAACTCCAG
GACGGCCCGA GCGGCCGGCC GCGCGCGACC CGAGAACGGC GAGTTCGGTA G
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| Protein sequence | MAADNIAAPG RSVLTGLRTT PVNARGLAVE AAWIATHLAL YPASALRRQR PREHEPYSLS
ALSPLHRSLL VNAPDAAGTP ILLIHGLIDN RSVFTRLGRS LRRRGFRRVR TVELPLLVPT
VQEAALRLAA SVHAAMTDSG RQRVHIVAHS LGGLVARYYV QQLGGDQYVD TLITLATPHS
GTRLAGLVPR SVPYRLVTQL RPGSALLREL AAPAPGCRTR FVAIGAGLDS VVRPAEAALD
HPDLDIENYT VPGLGHHSLA FSGKVAHLVA SCLAGAADRP GLSGPSELLD GGVPQEQALR
AGVLAEIDGR LRGVTDPAGG DDNSETETVM RHPVALTQLQ DGPSGRPRAT RERRVR
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