Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0648 |
Symbol | |
ID | 3902982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 739854 |
End bp | 740924 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637877981 |
Product | PGAP1-like |
Protein accession | YP_479761 |
Protein GI | 86739361 |
COG category | [R] General function prediction only |
COG ID | [COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00162479 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.67184 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCGCGG ACAACATCGC CGCTCCAGGG CGGTCGGTCC TCACCGGCCT GCGCACGACC CCGGTGAACG CCCGCGGGCT CGCCGTGGAA GCGGCCTGGA TCGCCACCCA CCTCGCCCTC TACCCGGCGA GTGCGCTGCG CCGGCAGCGC CCGCGCGAGC ACGAGCCCTA CTCGCTGAGC GCGCTCTCCC CGCTGCACCG CAGCCTGCTG GTCAACGCTC CCGACGCGGC AGGCACCCCG ATCCTGCTGA TCCACGGCCT GATCGACAAC CGGTCCGTGT TCACCCGGTT GGGCCGGTCG CTACGCCGCC GCGGTTTCCG CCGGGTGCGC ACGGTGGAGC TGCCGCTGCT CGTGCCGACG GTGCAGGAAG CGGCGCTCCG ACTCGCCGCG TCCGTGCACG CCGCGATGAC GGACAGCGGC AGGCAGCGCG TGCACATCGT CGCCCATTCA CTCGGCGGGC TGGTGGCCCG CTACTACGTG CAGCAACTCG GGGGCGATCA GTACGTGGAC ACGCTGATCA CTCTCGCGAC GCCTCATTCC GGCACCCGTC TCGCCGGGCT CGTCCCCCGG TCGGTGCCGT ACCGGCTCGT CACCCAGCTA CGGCCGGGAT CGGCGCTCCT ACGCGAGCTC GCCGCACCCG CCCCCGGCTG CCGGACCCGG TTCGTCGCGA TCGGCGCCGG GCTGGACAGC GTGGTGCGGC CCGCCGAGGC GGCGCTCGAC CATCCCGATC TCGACATCGA AAATTACACC GTGCCGGGCC TCGGGCATCA TTCCCTGGCG TTCAGCGGCA AGGTTGCCCA CCTGGTCGCG AGCTGCCTCG CCGGGGCGGC GGACCGGCCG GGACTCTCGG GACCGTCAGA GCTTCTCGAC GGGGGCGTAC CGCAGGAGCA GGCGCTTCGT GCCGGTGTTC TCGCCGAAAT CGATGGTCGC CTCCGCGGAG TCACCGACCC CGCCGGTGGC GACGACAACT CCGAGACCGA AACTGTCATG CGTCACCCGG TCGCCCTGAC GCAACTCCAG GACGGCCCGA GCGGCCGGCC GCGCGCGACC CGAGAACGGC GAGTTCGGTA G
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Protein sequence | MAADNIAAPG RSVLTGLRTT PVNARGLAVE AAWIATHLAL YPASALRRQR PREHEPYSLS ALSPLHRSLL VNAPDAAGTP ILLIHGLIDN RSVFTRLGRS LRRRGFRRVR TVELPLLVPT VQEAALRLAA SVHAAMTDSG RQRVHIVAHS LGGLVARYYV QQLGGDQYVD TLITLATPHS GTRLAGLVPR SVPYRLVTQL RPGSALLREL AAPAPGCRTR FVAIGAGLDS VVRPAEAALD HPDLDIENYT VPGLGHHSLA FSGKVAHLVA SCLAGAADRP GLSGPSELLD GGVPQEQALR AGVLAEIDGR LRGVTDPAGG DDNSETETVM RHPVALTQLQ DGPSGRPRAT RERRVR
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