Gene Francci3_0643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0643 
Symbol 
ID3903321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp729381 
End bp729803 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content66% 
IMG OID637877976 
Producthypothetical protein 
Protein accessionYP_479756 
Protein GI86739356 
COG category[R] General function prediction only 
COG ID[COG2018] Uncharacterized distant relative of homeotic protein bithoraxoid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.333346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACACCCG TGAGTTCTGA AGCCCAGAAC CTCAATTGGT TGATCAACAA TTTTGTCGAT 
CGCGTCCCGG GTGTCGCCCA CACCGTTGTG GTGTCCGCAG ACGGCCTGCT ACTCGCCGTC
TCCGACGGTT TCCCCCGGGA TCGCGCCGAC CAGCTCGCCG CGGTGGCCTC GGGACTGGTG
AGCCTGACCC AGGGCGCCGC CCGCGTCTTC GAGGCGGGCG GCGTCACCCA GACGGTCGTG
GAGATGGAGC ACGGCTTTCT CTTCATCATG GCAATCAGTG ACGGCGCGAG CATGGCAGTG
CTCGCGGCAC CGTCCTGCGA CATCGGTCTG GTCGGCTATG AGATGGCACT GCTGGTCAGC
CGGGCGAAGG ACGTCCTGAC CCCGGCGTTG CGCGCCGAAC TGCAGGGAAC CCTTCCGCGG
TGA
 
Protein sequence
MTPVSSEAQN LNWLINNFVD RVPGVAHTVV VSADGLLLAV SDGFPRDRAD QLAAVASGLV 
SLTQGAARVF EAGGVTQTVV EMEHGFLFIM AISDGASMAV LAAPSCDIGL VGYEMALLVS
RAKDVLTPAL RAELQGTLPR