Gene Francci3_0641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0641 
Symbol 
ID3903319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp728419 
End bp729015 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content65% 
IMG OID637877974 
Productprotein of unknown function, ATP binding 
Protein accessionYP_479754 
Protein GI86739354 
COG category[R] General function prediction only 
COG ID[COG2229] Predicted GTPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.437609 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCTTCG AAAGCTCTGA CAACAGGCGG GTCAACTCCG CCGTCGCCAC GACCTCGGTG 
AAGATCGTGG TAGCGGGCGG ATTCGGCGCC GGGAAAACCA CATTCGTGGG TTCGGTGTCC
GAGATCGTCC CGCTGCGCAC CGAGGCCGTC ATGACCGAGG CGGGAGCCCA CATCGACGAC
CTCACCCACC TGATGGACAA GACCACCACC ACGGTCGCCA TGGACTTCGG CCGAGTCTCG
CTGGACGAAG ATCTGATCCT GTATCTGTTC GGCACCCCCG GGCAGTACCG CTTCTGGTTC
ATGTGGGACG ATATCGTGCG GGGAGCCATC GGTGCGATCG TGCTCGCCGA CACCCGCCGA
CTGGCCGATT GCTTCGCCGC GGTCGACTAC TTCGAGCAGC GGCAGTTGCC CTTCGTGATT
GGCGTCAACT GCTTCGACGG GATCCTGCGG CACTCGATCG AGGACGTCCG GGAAGCACTG
CAGGTCAGCC CGGCCGTTCC CGTCATCACC TGCGACGCCC GCAACCGCGA CTCCACCAAG
AGCGCGCTGA TCGCGGTGGT CGAGCACACG ATGTCGCGGG CGACCGCAGG GACCTGA
 
Protein sequence
MAFESSDNRR VNSAVATTSV KIVVAGGFGA GKTTFVGSVS EIVPLRTEAV MTEAGAHIDD 
LTHLMDKTTT TVAMDFGRVS LDEDLILYLF GTPGQYRFWF MWDDIVRGAI GAIVLADTRR
LADCFAAVDY FEQRQLPFVI GVNCFDGILR HSIEDVREAL QVSPAVPVIT CDARNRDSTK
SALIAVVEHT MSRATAGT