| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0629 |
|---|
| Symbol | |
|---|
| ID | 3903307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 713181 |
|---|
| End bp | 713816 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637877962 |
|---|
| Product | phosphodiesterase |
|---|
| Protein accession | YP_479742 |
|---|
| Protein GI | 86739342 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1182] Acyl carrier protein phosphodiesterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.936388 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCACC TGCTGCACGT CGACTCGAGC CTCGCCACCG AGAGCTCGAC GTCCCGATCG
ATCGCCACCA TCTTCGCCGA GGCCTGGCGC GAGGCGCACC CAGACGGGAT CATCACCTAT
CGTGATCTGT CTGTCACCCC TCCTCCGCAC CTGGACTGGG CGACCGTGTC GGCGAGGTTC
ACCCCGCCCG AGCAGCTCTC GGCGGAGCAA GCCGAGGCGG TCAAGAAAGG AGAGGAGCTG
ATCGCCGAGG TGGAGGCGGC AGACGAGTAC CTGCTGTCGG TACCGATGTA CAACTACGCG
GTGCCGTCGA CGTTCAAGGC GTGGATCGAC CAGATCATCG TCATGGGACG CACGGTGCGG
CAGGCTCCGG ACGACAGCGC CCTCACCGGC AAGAAGGTGA CGGTGGTCAC CGCCCAGGGC
GGGTCCTACG GGCCAGGCAC ACCCAAGGAG GGCTGGGATC ACCAGCAGCC CTACGTGGCA
CACATCCTGG CGGCACTCGG CGCCACGGAC ATCGAGTTCA TCCGCGTCGA GATGACGCTC
GCCCCGGTGA ATCCGGCGCT GGCCGAGTTC ATCGACCTGT TCCAGCGCTC CAAGGCGGAG
GCGGCGGCCG CGGCTCGGCT ACGCGCCTCC GTCTGA
|
|---|
| Protein sequence | MPHLLHVDSS LATESSTSRS IATIFAEAWR EAHPDGIITY RDLSVTPPPH LDWATVSARF
TPPEQLSAEQ AEAVKKGEEL IAEVEAADEY LLSVPMYNYA VPSTFKAWID QIIVMGRTVR
QAPDDSALTG KKVTVVTAQG GSYGPGTPKE GWDHQQPYVA HILAALGATD IEFIRVEMTL
APVNPALAEF IDLFQRSKAE AAAAARLRAS V
|
|---|
| |