| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0621 |
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| Symbol | |
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| ID | 3903489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 704904 |
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| End bp | 706508 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 637877954 |
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| Product | hypothetical protein |
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| Protein accession | YP_479734 |
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| Protein GI | 86739334 |
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| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
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| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0172288 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.797481 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAATG CCCATACGGT CGAACAGGTT CGAGGTGCCG AGGCGCCGCT GCTCGCCTCG
CTGCCCCCCG GCGCTCTGAT GCAGCGGGCG GTGCACGGGC TCGTCGCGCA CGCCGCACGA
CGCCTCGGGC GGGTCTACGG TGCCCGCGTC GTCGTGCTCG CCGGCGGTGG CGACAACGGT
GGTGACGCCC TCTGGGCCGG AGCGCGGCTG GCCGCCCGAG GGGCGCGGAT TGATGCGGTG
GCACCCGGCC GCACCCACCC GGAAGGCACC GCAGCCCTGC TTGCGGCCGG TGGCCGACTG
CACCATCCGG GTCCGGTGGT GGGCGCGGGC GGTCCGGCGG GTGCGGGGCA GCCGATCGAC
GATGAGCGGC TGCGTATCCT GTTCGCCGCC GCCGATCTGG TGCTGGACGG GTTGCTCGGC
ATCGGGGGCC GGGGCGGGCT GCGCGAGCCG TACGCCCGGC TCGCCGTTCT GGCACCCCCC
GAACGGACGG TGGCGGTCGA CGTCCCCAGC GGGGTGGACG CGGACACCGG GGCCGTCGCG
GGGCCGGCGG TCCGGGCGAG CAGTACCGTC ACCTTCGGTA CCCGCAAACG CGGCCTGTGG
CTCATGCCCG GTGCCGCCCA CACCGGCCCC GTCGAGCTGG TCGACATCGG ACTGGACCTG
CCTGAACCCG ACCTGTGCGC TCTCGACGAC GCCGACGTCG CCGCGGCATT GCCCGTTCCC
AGCCCGACGG CGTCCAAGTA CAGTCGCGGG GTCCTCGGCC TCGTCGCCGG CAGCGACGCC
TATCCGGGCG CCGCGGTGCT CGCGGTCGGC GGCGCGCTGC GTGGTGGCGC CGGGTACCTG
CGGGTAGTGA CCGCGGGGCA CGCCGAGAAG GTCGCGGGCG AGGCCGTCGG CGCGGTCGTG
AGCAGGGCCG GCGATTTCGT GCGGATGGCG CATCCCGAGG CCGTCGTGAC CGTCATCGAG
GCCGGTGACG CCGACACGAT GCTGGCCGCC GGCCGGGTCC AGGCCTGGGC GATCGGCCCA
GGCCTGGCGC CGGGACCCGC GGTCCGTACC CTGCTGACGG CGTTGCTGGC GACGGACCTT
CCGGTCCTGG TCGACGCGGG GGGCCTCGAC CCGCTTGCCG AGATCATCGC GGCGCGGCCC
GCCGTCGCCG AGCGGGCGGC GCCGGTGCTG ATCACACCGC ATGAGGGCGA GTTCCAGCGG
TTCGTCTCGG TCGCCCTTGG CCGGGACGCG CAGGCCACCG TCGCCGAACT CGCCGACGAT
CGGCTCGCTG TTCTCCGGCG GGCCGCGGCG GCGACGGGAG CGGTGATCCT GCTCAAGGGC
GCCCGCACAC TCGTCGTGCG GCCGGATGGA TCGGCGCTGG TCAACACGAC CGGATCGGCA
TGGCTGGGGA CCGCCGGGAC CGGTGACGTG CTGACCGGCC TGATCGGCTC GCTGCTCGCC
GCCGGGCTCG CCCCCGCGAC GGCCGGGGCG GTCGGCGCCT ATCTGCACGG CCGGGCCGCC
GAGCGGGCCC CGGCGCCGCT GGCAGCGAAT GATCTGCCCG CCCTCCTGCC CCAGGTCATC
GGCGACCTGC TTGACCGGCG ACGGATGCCA CGCGGAGTAG CGTGA
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| Protein sequence | MRNAHTVEQV RGAEAPLLAS LPPGALMQRA VHGLVAHAAR RLGRVYGARV VVLAGGGDNG
GDALWAGARL AARGARIDAV APGRTHPEGT AALLAAGGRL HHPGPVVGAG GPAGAGQPID
DERLRILFAA ADLVLDGLLG IGGRGGLREP YARLAVLAPP ERTVAVDVPS GVDADTGAVA
GPAVRASSTV TFGTRKRGLW LMPGAAHTGP VELVDIGLDL PEPDLCALDD ADVAAALPVP
SPTASKYSRG VLGLVAGSDA YPGAAVLAVG GALRGGAGYL RVVTAGHAEK VAGEAVGAVV
SRAGDFVRMA HPEAVVTVIE AGDADTMLAA GRVQAWAIGP GLAPGPAVRT LLTALLATDL
PVLVDAGGLD PLAEIIAARP AVAERAAPVL ITPHEGEFQR FVSVALGRDA QATVAELADD
RLAVLRRAAA ATGAVILLKG ARTLVVRPDG SALVNTTGSA WLGTAGTGDV LTGLIGSLLA
AGLAPATAGA VGAYLHGRAA ERAPAPLAAN DLPALLPQVI GDLLDRRRMP RGVA
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