| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0618 |
|---|
| Symbol | |
|---|
| ID | 3903486 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 702673 |
|---|
| End bp | 703233 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637877951 |
|---|
| Product | zinc finger, SWIM-type |
|---|
| Protein accession | YP_479731 |
|---|
| Protein GI | 86739331 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.485971 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCATTT CGGGGTCCGG GGAGAACGGG CACGGCGGAG ACGCCGTCAC CCCGCTCGAG
GCAGCCTTCG AGGAACGCGC CTGCGCACAG CACGCCGGCA CCGACGTCTT CATGGAAGGG
GTGAATCTGG CTCTTCTCGG TCGAGTCGAA CAACTCCGTA TCCGCCCCAC CAACGCATCC
GGCACGGTGG ACGACGACGG TTCGTACGAG GTCCGCCTGG AGGCGGCCGA CGACGGGCCA
CGGACGGGCT GTACCTGCAC CGAGGGATCC ACCGGCTCGT TCTGCCGGCA CGCGGTCGCG
GTCGCCCTCG TGGCCACCGG CTCGGCGGGG CTCGCCGAGG ACGACGAGGG GGAGGACGGC
ACGATCCTCG GCGAGGAGAC CCTCTTCACC GACGACCCGG TCCACGCCGC GATGCGCGTC
TTCCTCAGCC GCGCCCCTCG CGCCGAACTT GTCGAGACCC TGCTCGACGC CGCCGACGAC
AACGACGCCG TCGCCGATGC GCTGTGGGAG GCGACGGTCG CCTGGCACGG CCGTCAGCAC
GGAGCGACGC CGTCCACCTG A
|
|---|
| Protein sequence | MIISGSGENG HGGDAVTPLE AAFEERACAQ HAGTDVFMEG VNLALLGRVE QLRIRPTNAS
GTVDDDGSYE VRLEAADDGP RTGCTCTEGS TGSFCRHAVA VALVATGSAG LAEDDEGEDG
TILGEETLFT DDPVHAAMRV FLSRAPRAEL VETLLDAADD NDAVADALWE ATVAWHGRQH
GATPST
|
|---|
| |