Gene Francci3_0616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0616 
SymbolglmM 
ID3903484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp699047 
End bp700414 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content72% 
IMG OID637877949 
Productphosphoglucosamine mutase 
Protein accessionYP_479729 
Protein GI86739329 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID[TIGR01455] phosphoglucosamine mutase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.508325 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAGGC TCTTTGGCAC CGACGGCGTC CGAGGTGTCG CCAACATCGA TCTGACCGCG 
GAGCAGGCGT TGTCGCTGGC TTCCGCGGCG GTCGAGGTCC TCGCTGGGCC GAACCGGACC
AGCGGGCCCT CCGGCCGCGG TAAGCCGGTA GTGGTCGTCG GCCGGGACAC GCGGCCCTCC
GGGGAGTTCC TGGAGGCCGC GGTGGTCGCC GGGCTCGCGG CCTCCGGTGC CGACGTGGCC
CGGATCGGGG TGGCACCCAC GCCCGCGGTG GCTCACGCCG TCGCGGCCAG CGGCGCGATG
TTCGGCGTCA TGCTCTCCGC CAGCCATAAC CCGATGCCGG ACAACGGCAT CAAGCTGTTC
GCCGCCGGCG GCCTCAAACT GCCCGACGAG GTCGAGGATG CCATCGAGCG GCGGATGGCC
CTACCTCCCA GCCGCCGTCC CGTCGGCGCC GACGTCGGTC GGGTCCGCGA CGAACCGGTT
CTCCTCGACC GGTATGCGGC GCATCTGCTG GCCACGCTGC CGGTGCCGCT CGACGGCCTG
CGGGTCGTCG TCGACTGTGC CCAGGGCGCC GCCTCCACCT TGGCCCCTCG GGTGCTGCGG
GCGGCCGGAG CCGACGTCGT CGCGCTGCAC GCCGACGGCG ACGGGATAGC GATCAACGAC
GGCAGCGGTG CCACCCATCT CGACAGCCTG CGTGCCGCGG TCGTGGCGCA CGGCGCCGAC
GTCGGCATCG CCCATGACGG CGACGCGGAC CGTTGCCTCG CCGTGGACGC GACCGGTGAG
GTCGTCGACG GCGACCAGAT CCTGGCGATG TGTGCTCTGG CGCTGGCCGA GCGGGGTGAG
CTGGTCGACG ACACGGTGGT GGTCACCGTG ATGTCGAATC TGGGCTTTCA CCACGCGATG
CGGGAGGCCG GTATCACCGT CGTCACTACA CCCGTCGGAG ATCGGTACGT GCTGGAGACG
ATGCGCGCCG GAGGCTACGT GCTCGGCGGT GAGCAGAGCG GGCACGTGGT GTTCCTGGAC
CACGCGACGA CCGGCGATGG GTTGTTGACG GCGTTGCGGA TCCTGGGCCG GGTCGCCGAG
ACCGGACAAC CGCTCGGCGA GCTCACCAAG GCGATGACCC GGCTGCCCCA GGTGTTGGTG
AACGTGCGTG GCGTCGACCG GACACAGGTG GACACCAATG AGGAACTGCT GCGGGCCGTC
GCCCTGGCCA AGGCGGAACT CGGTGACGAG GGTCGGGTGC TGCTGCGGTC GTCCGGCACC
GAACCCCTCG TGCGGGTGAT GGTCGAGGCG GGCACCGACG CCGCCGCGCG GGCGGTCGCA
CAGCGGCTCG CCGCCGTCGT GCGCACCGCG TTGCCGCCGG CGCGCTGA
 
Protein sequence
MVRLFGTDGV RGVANIDLTA EQALSLASAA VEVLAGPNRT SGPSGRGKPV VVVGRDTRPS 
GEFLEAAVVA GLAASGADVA RIGVAPTPAV AHAVAASGAM FGVMLSASHN PMPDNGIKLF
AAGGLKLPDE VEDAIERRMA LPPSRRPVGA DVGRVRDEPV LLDRYAAHLL ATLPVPLDGL
RVVVDCAQGA ASTLAPRVLR AAGADVVALH ADGDGIAIND GSGATHLDSL RAAVVAHGAD
VGIAHDGDAD RCLAVDATGE VVDGDQILAM CALALAERGE LVDDTVVVTV MSNLGFHHAM
REAGITVVTT PVGDRYVLET MRAGGYVLGG EQSGHVVFLD HATTGDGLLT ALRILGRVAE
TGQPLGELTK AMTRLPQVLV NVRGVDRTQV DTNEELLRAV ALAKAELGDE GRVLLRSSGT
EPLVRVMVEA GTDAAARAVA QRLAAVVRTA LPPAR