Gene Francci3_0615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0615 
Symbol 
ID3903483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp698530 
End bp698937 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content69% 
IMG OID637877948 
ProductSSU ribosomal protein S9P 
Protein accessionYP_479728 
Protein GI86739328 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0103] Ribosomal protein S9 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.733906 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.442005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGTCG TGACCGACGT ACAGGGCAAT CCCCGCGCCA CCGGGCGGCG CAAGGAGGCG 
GTCGTCCGGG TGCGTCTGCT CCCGGGGACC GGGCAGTGGA CGCTCAACGG GCGCACGCTT
GAGCAGTATT TCCCGAACAA GGTGCACCAG CAGCTCGTCA ACGAGCCGCT CAAGGCACTG
GATCGGATGG AGTCGTACGA CATCGTCGCC CGGCTGCACG GCGGCGGCGT CTCCGGGCAG
GCCGGTGCGC TGCGGCTCGC CCTCGCCCGC GCGTTGACGC TGGCGGAGGA GGAGTCCCGG
CCTACCCTGA AGAAGGCCGG CTTCCTGACC CGTGACGCTC GGGTCAAGGA GCGTAAGAAG
TACGGGCTCA AGAAGGCCCG CAAGGCTCCG CAGTACAGCA AGCGCTGA
 
Protein sequence
MAVVTDVQGN PRATGRRKEA VVRVRLLPGT GQWTLNGRTL EQYFPNKVHQ QLVNEPLKAL 
DRMESYDIVA RLHGGGVSGQ AGALRLALAR ALTLAEEESR PTLKKAGFLT RDARVKERKK
YGLKKARKAP QYSKR