Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0614 |
Symbol | rplM |
ID | 3903482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 697993 |
End bp | 698436 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637877947 |
Product | 50S ribosomal protein L13 |
Protein accession | YP_479727 |
Protein GI | 86739327 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0102] Ribosomal protein L13 |
TIGRFAM ID | [TIGR01066] ribosomal protein L13, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.622758 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.679484 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCACGT ACCAGCCCAA GCCCGCGGAT GTCCAGCGTG TGTGGCACGT CATCGATGCC ACCGACGTGG TGCTCGGTCG GCTGGCGACC CAGGCCGCCA CGCTCCTGCG TGGAAAGCAC AAGCCGTACT TCGCTCCGCA TATCGACACC GGCGACTTCG TCGTCGTGAT CAACGCGGGT AAGGTCGCCC TGAGCGGGAA CAAGCGGGAG CAGGCCCAGT ACCACCGGCA CTCCGGCTTC CCGGGCGGTC TGCGCAGCAC CTCCTACGGG GAGCTGCTCG ACACCCGTCC GCAGATCATC GTCGAGAAGG CGATCAAGGG CATGCTGCCG AAGAACAAGC TCGGCCGAGC CCAGGGGACC AAGCTGAAGG TCTATGCGGG TCCGACTCAC CCGCACCAGG CGCAGCAGCC CACCCCGTTC GAGATCATCC AGGTCGCGCA GTAG
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Protein sequence | MRTYQPKPAD VQRVWHVIDA TDVVLGRLAT QAATLLRGKH KPYFAPHIDT GDFVVVINAG KVALSGNKRE QAQYHRHSGF PGGLRSTSYG ELLDTRPQII VEKAIKGMLP KNKLGRAQGT KLKVYAGPTH PHQAQQPTPF EIIQVAQ
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