Gene Francci3_0614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0614 
SymbolrplM 
ID3903482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp697993 
End bp698436 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content66% 
IMG OID637877947 
Product50S ribosomal protein L13 
Protein accessionYP_479727 
Protein GI86739327 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0102] Ribosomal protein L13 
TIGRFAM ID[TIGR01066] ribosomal protein L13, bacterial type 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.622758 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.679484 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCACGT ACCAGCCCAA GCCCGCGGAT GTCCAGCGTG TGTGGCACGT CATCGATGCC 
ACCGACGTGG TGCTCGGTCG GCTGGCGACC CAGGCCGCCA CGCTCCTGCG TGGAAAGCAC
AAGCCGTACT TCGCTCCGCA TATCGACACC GGCGACTTCG TCGTCGTGAT CAACGCGGGT
AAGGTCGCCC TGAGCGGGAA CAAGCGGGAG CAGGCCCAGT ACCACCGGCA CTCCGGCTTC
CCGGGCGGTC TGCGCAGCAC CTCCTACGGG GAGCTGCTCG ACACCCGTCC GCAGATCATC
GTCGAGAAGG CGATCAAGGG CATGCTGCCG AAGAACAAGC TCGGCCGAGC CCAGGGGACC
AAGCTGAAGG TCTATGCGGG TCCGACTCAC CCGCACCAGG CGCAGCAGCC CACCCCGTTC
GAGATCATCC AGGTCGCGCA GTAG
 
Protein sequence
MRTYQPKPAD VQRVWHVIDA TDVVLGRLAT QAATLLRGKH KPYFAPHIDT GDFVVVINAG 
KVALSGNKRE QAQYHRHSGF PGGLRSTSYG ELLDTRPQII VEKAIKGMLP KNKLGRAQGT
KLKVYAGPTH PHQAQQPTPF EIIQVAQ