Gene Francci3_0608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0608 
Symbol 
ID3905891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp692051 
End bp692455 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content68% 
IMG OID637877941 
Product30S ribosomal protein S11 
Protein accessionYP_479721 
Protein GI86739321 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0100] Ribosomal protein S11 
TIGRFAM ID[TIGR03632] 30S ribosomal protein S11 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCCCA AGACGCGCGC AGCCGGCGCC AAGAAGGTCC GGCGCAAGGA AAAGAAGAAC 
GTCGCCCACG GACACGCTCA CATCAAGAGC ACGTTCAACA ACACGATCGT CTCCATCACC
GACCCGTCCG GGAACGTGAT CTCCTGGGCT TCGGCGGGTC ATGTCGGCTT CAAGGGCTCC
CGCAAGTCCA CGCCCTTCGC CGCCCAGATG GCGGCCGAGA ACGCGGCCCG CAAGGCGCAG
GAGCACGGGA TGCGCAAGGT CGACGTCTTC GTGAAGGGCC CGGGTTCCGG CCGGGAGACC
GCGATCCGTT CCCTGCAGGC CGCGGGGCTC GAGGTCGGTG CGATCCAGGA CGTCACCCCG
ACCCCGCACA ACGGTTGCCG CCCGCCCAAG CGGCGCAGGG TGTGA
 
Protein sequence
MPPKTRAAGA KKVRRKEKKN VAHGHAHIKS TFNNTIVSIT DPSGNVISWA SAGHVGFKGS 
RKSTPFAAQM AAENAARKAQ EHGMRKVDVF VKGPGSGRET AIRSLQAAGL EVGAIQDVTP
TPHNGCRPPK RRRV