Gene Francci3_0589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0589 
SymbolrplP 
ID3905872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp681994 
End bp682410 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content67% 
IMG OID637877922 
Product50S ribosomal protein L16 
Protein accessionYP_479702 
Protein GI86739302 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0197] Ribosomal protein L16/L10E 
TIGRFAM ID[TIGR01164] ribosomal protein L16, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATTC CCCGGAAGGT CGCGCACCGC AAGCAGCACC ACCCCGGGCG GACCGGTGCC 
GCCAAGGGCG GAACCCGGGT CACGTTCGGT GAGTACGGGA TCCAGGCCTT GGAGTCGGCC
TACGTGACGA ACCGGCAGAT CGAGTCGGCC CGTATCGCGA TGACCCGGCA CATCCGTCGT
GGTGGAAAGG TCTGGATCAA CATCTACCCG GACCGTCCGC TGACCAAGAA GCCGGCCGAG
ACCCGGATGG GTTCTGGTAA GGGCTCGCCC GAGTGGTGGG TCGCGAACGT CAAGCCGGGC
CGGGTCCTGT TCGAGCTGTC CGGGGTCGCG GAGCCGGTGG CCCGCGAGGC GATGCGGCGG
GCTATCCACA AGCTGCCGAT GAAGTGCCGT TTCGTGGTCC GTGAAGGTGG TGCGTAA
 
Protein sequence
MLIPRKVAHR KQHHPGRTGA AKGGTRVTFG EYGIQALESA YVTNRQIESA RIAMTRHIRR 
GGKVWINIYP DRPLTKKPAE TRMGSGKGSP EWWVANVKPG RVLFELSGVA EPVAREAMRR
AIHKLPMKCR FVVREGGA