Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_0589 |
Symbol | rplP |
ID | 3905872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 681994 |
End bp | 682410 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637877922 |
Product | 50S ribosomal protein L16 |
Protein accession | YP_479702 |
Protein GI | 86739302 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0197] Ribosomal protein L16/L10E |
TIGRFAM ID | [TIGR01164] ribosomal protein L16, bacterial/organelle |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGATTC CCCGGAAGGT CGCGCACCGC AAGCAGCACC ACCCCGGGCG GACCGGTGCC GCCAAGGGCG GAACCCGGGT CACGTTCGGT GAGTACGGGA TCCAGGCCTT GGAGTCGGCC TACGTGACGA ACCGGCAGAT CGAGTCGGCC CGTATCGCGA TGACCCGGCA CATCCGTCGT GGTGGAAAGG TCTGGATCAA CATCTACCCG GACCGTCCGC TGACCAAGAA GCCGGCCGAG ACCCGGATGG GTTCTGGTAA GGGCTCGCCC GAGTGGTGGG TCGCGAACGT CAAGCCGGGC CGGGTCCTGT TCGAGCTGTC CGGGGTCGCG GAGCCGGTGG CCCGCGAGGC GATGCGGCGG GCTATCCACA AGCTGCCGAT GAAGTGCCGT TTCGTGGTCC GTGAAGGTGG TGCGTAA
|
Protein sequence | MLIPRKVAHR KQHHPGRTGA AKGGTRVTFG EYGIQALESA YVTNRQIESA RIAMTRHIRR GGKVWINIYP DRPLTKKPAE TRMGSGKGSP EWWVANVKPG RVLFELSGVA EPVAREAMRR AIHKLPMKCR FVVREGGA
|
| |