| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0574 |
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| Symbol | |
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| ID | 3905744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 666530 |
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| End bp | 670417 |
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| Gene Length | 3888 bp |
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| Protein Length | 1295 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637877907 |
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| Product | DNA-directed RNA polymerase subunit beta' |
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| Protein accession | YP_479687 |
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| Protein GI | 86739287 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTGGACG TCAACTTCTT CGACGAACTG CGCATCGGTC TCGCCACCGC GGATGACATC
CGCCAGTGGT CGCACGGTGA GGTCAAGAAG CCCGAGACGA TCAACTACCG CACCCTGAAG
CCGGAGAAGG ACGGGCTCTT CTGCGAGAAG ATCTTCGGTC CGACCCGGGA CTGGGAGTGC
TACTGCGGCA AGTACAAGCG GGTCCGGTTC AAGGGCATCA TCTGTGAGCG CTGCGGCGTC
GAGGTGACCC GGGCCAAGGT CCGCCGTGAG CGCATGGGCC ACATCGAGCT GGCTGCGCCG
GTCACCCACA TCTGGTACTT CAAGGGTGTC CCGAGCCGCC TCGGCTACCT GCTGGACCTC
GCGCCGAAGG ACCTCGAGAA GGTCATCTAC TTCGCCGCGT ACATGATCAC AAAGGTGGAC
ACGGACGCCC GCCACCGCGA TCTGCCGACC CTCGAGGCCC GCATCGGCGT CGAGAAGCAG
CAGCTCGAGG ACAAGAAGAA CGCCGACGTG GAAGTCCGGC AGAAGCGGCT CGAGGCCGAC
CTCGCACAGC TCGAGGCCGA GGGCGCCAAG GGTGACGCGC GACGCAAGGT CCGCGAGTCG
GCCGAGCGCG AGATGCGCCA GCTCCGGGAC CGGGTGCAGC GTAAGATCGA CGATCTCGAC
CGCGTCTTCG ACCGGTTCAA GAACATGAAG GTCCAGGACC TGGAGCCGGA CGAGCTGCTT
TATCGCGAGC TGCGCGACCG CTTCGGTGCG TACTTCGACG GCGGTATGGG CGCCGAGGCG
CTGCAGCGGC GGCTGGCCGA CTTCGACCTG GCCGCCGAGG CCGAGTCGCT GCGCGAGACC
ATCCGCAGCG GCAAGGGGCA GAAGAAGGCC CGCGCGCTCA AGCGGCTCAA GGTCGTCTCC
GCGTTCCTGA ACACCCGCAA CTCCCCGATG GGGATGGTGC TCGACTGCGT CCCGGTGATC
CCACCCGATC TGCGCCCGAT GGTGCAGCTC GATGGTGGCC GGTTCGCCAC CTCGGACCTC
AACGACCTGT ACCGCCGGGT GATCAACCGG AACAACCGGT TGAAGCGGCT GCTCGACCTC
GGCGCGCCCG AGATCATCGT CAACAACGAG AAGCGGATGC TGCAGGAGGC CGTCGACGCG
CTGTTCGACA ACGGCCGCCG CGGCCGGCCG GTCACCGGCC CGGGTAACCG CCCGCTGAAG
TCGCTGTCCG ACATGCTCAA GGGCAAGCAG GGCCGGTTCC GCCAGAACCT GCTGGGCAAG
CGGGTCGACT ACTCCGGCCG TTCGGTCATC GTCGTCGGTC CGCAGCTCAA GCTGCACCAG
TGCGGTCTGC CCAAGCAGAT GGCGCTGGAG CTGTTCAAGC CGTTCGTGAT GAAGCGCCTG
GTGGACCTCA ACCACGCGCA GAACATCAAG TCGGCGAAGC GGATGGTCGA GCGGGCCCGC
CCGGTCGTGT GGGACGTGCT CGAGGAGGTC ATCACCGAGC ACCCCGTGCT GCTCAACCGG
GCGCCGACCC TGCACCGCCT CGGCATCCAG GCCTTCGAAC CGCAGCTCGT CGAGGGCAAG
GCCATCCAGA TCCACCCGCT GGTCTGCACG GCGTTCAACG CCGACTTCGA CGGTGACCAG
ATGGCGGTGC ACCTGCCGCT GTCCGCCGAG GCGCAGGCCG AGGCGCGGAT CCTGATGCTG
TCGAGCAACA ACATTCTCTC GCCCGCATCG GGCCGGCCGC TGGCGATGCC GAGCCTCGAC
ATGGTGACCG GGGTGTTCCA CCTGTCCCGC CTGGCCGAGG GGGCGCTCGG CGAGGGGCGG
TCGTTCTCCA GCGTCGCCGA GGCGCAGATG GCCTTCGACG CCCGGGAGGT CGCCCTTCAG
GCGAAGATCA GGGTGCGGTT GCGGGACACC ACCCCGCCGT CGGACTGGGT CCCGCCCGCC
GACTGGGTCA CCGGGGACGT GTTCACCCTG GAGACCACGT TCGGTCGTTG CCTGCTCAAC
GAGGCGCTGC CGGAGGGCTA CCCCTTCATC AACGCCCAGC TGAACAAGAA GGCCCAGGCC
GCGATCGTCA ACGACCTGGC CGAGCGGTAC CCGAAGATCC AGGTAGCGGC GACCCTGGAC
GCCCTGAAGA GCGCCGGTTT CTACTGGGCC ACCCGGTCCG GGGTCACCGT CGCGATCGAG
GACGTCGTCG CGCCGCCGAA CAAGGCCGAG ATCCTCGACG ACTACGAGCA GCGTGCCGAC
CGGGTCCAGA AGCAGTTCGA CCGCGGCTTC CTGTCCGACG AGGAGCGCCG CAGCGAGCTG
GTCCAGATCT GGACCGAGGC GACCAACAAG ATCGCCGAGG CGATGGAGGA GAACTTCCCG
GAGACCAACC CGGTCTACGT GCTGGTCAAC TCCGGAGCCG CTGGAAACAT GATGCAGATC
CGGCAGCTCG CCGGCATGCG TGGTCTGGTC TCCAACCCGA AAGGTGAGAT CATCCCGCGG
CCGATCAAGG CGAACTTCCG CGAGGGCCTG ACCGTGCTGG AGTACTTCAT CTCCACCCAC
GGTGCCCGTA AGGGACTCGC CGACACCGCC CTGCGCACCG CGGACTCGGG GTACCTGACC
CGGCGGCTCG TCGACGTCAG CCAGGATGTC ATCGTCCGCG AGGAGGACTG CGGCACCGAG
CGCGGCATCC TCACTCGGAT CGCCCGCAAG GGCGCCGACG GGGTGCTGGT CCGGGACCGG
TATGCCGAGA CCTCGGCGTA CGCGCGGACG CTGGCCTCCG ACGCGATCGA CGCGAACGGC
GAGGTCATCG TGCCCGCCGG CACCGACGCC GGGGACGTCG CGATCAGCCA GATCATCGAG
GCCGGCATCG AGCAGGTGCG GGTCCGCTCG GCGCTGACCT GCGAGTCCCG GATGGGGGTG
TGCGCCCAGT GCTACGGGCG CTCGCTCGCC ACCGGCAAGC TGGTTGACGT CGGTGAGGCC
GTCGGCATCG TCGCCGCGCA GTCCATCGGT GAGCCCGGCA CCCAGCTGAC GATGCGTACC
TTCCACAGCG GTGGCGTCGC CGGCGACGAC ATCACCCAGG GTCTGCCGCG TGTCGTCGAG
CTGTTCGAGG CGCGCAGCCC GAAGGGCAAG GCCCCCATCA CCGAGGTCTC CGGCCGGGTG
AAGATCGAGG AGACCGAGAA GACCTTCAAG GTCGTGGTGG TGCCGGACGA CGGCAGCGAC
GAGATCGCCT ACCCGGTCTC GCGGCGTTCG CGCCTGCGGG TCCGCGAGGG CGACCACATC
GAGGTCGGCA GCCAGATTGT CGACGGTGCC GTCGACCCGC ACGAGGTGTT GCGCATCCTC
GGGCCGCGCC AGGTCCAGCT CCACCTGGTG GACCAGGTCC AGGAGGTCTA CCGGTCGCAG
GGTGTGTCGA TCCACGACAA GCACATCGAA ATCATCATCC GCCAGATGCT CAAGCGGGTG
AACGTTCTCG AGTCGGGCGA CACCACCCTG CTGCCCGGTG AGCTCTGCGA GCGGGCCCGG
TTCGAGGCGG AGAACCGTCG GGTGGTGGAA ACCGGTGGCC AGCCGGCCTC GGCCCGCCCG
GTCCTCATGG GAATCACCAA GGCGTCGCTG GCGACCGAGT CGTGGCTGTC GGCGGCCTCC
TTCCAGGAGA CGACTCGGGT GCTCACCGAC GCGGCGATCA ACGCCCGGTC GGACTCGCTC
GTCGGCCTGA AGGAGAACGT CATCATCGGA AAGCTCATCC CGGCCGGCAC CGGGATCTCC
CGGTACCGCA ACATCCGGGT CGAGCCGACC GAGGAGGCAC GTGCGGCGAT GTACTCCGTC
GGTGCCTACG AGGACGGCGG CGTCGAGTAC GGTGCGTTCG GCACGGGCTC CGGCCAGGCG
GTCCCGCTGG ACGAGTTCGA CTACCGCAGC TCGGGAGACT TCCGCTGA
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| Protein sequence | MLDVNFFDEL RIGLATADDI RQWSHGEVKK PETINYRTLK PEKDGLFCEK IFGPTRDWEC
YCGKYKRVRF KGIICERCGV EVTRAKVRRE RMGHIELAAP VTHIWYFKGV PSRLGYLLDL
APKDLEKVIY FAAYMITKVD TDARHRDLPT LEARIGVEKQ QLEDKKNADV EVRQKRLEAD
LAQLEAEGAK GDARRKVRES AEREMRQLRD RVQRKIDDLD RVFDRFKNMK VQDLEPDELL
YRELRDRFGA YFDGGMGAEA LQRRLADFDL AAEAESLRET IRSGKGQKKA RALKRLKVVS
AFLNTRNSPM GMVLDCVPVI PPDLRPMVQL DGGRFATSDL NDLYRRVINR NNRLKRLLDL
GAPEIIVNNE KRMLQEAVDA LFDNGRRGRP VTGPGNRPLK SLSDMLKGKQ GRFRQNLLGK
RVDYSGRSVI VVGPQLKLHQ CGLPKQMALE LFKPFVMKRL VDLNHAQNIK SAKRMVERAR
PVVWDVLEEV ITEHPVLLNR APTLHRLGIQ AFEPQLVEGK AIQIHPLVCT AFNADFDGDQ
MAVHLPLSAE AQAEARILML SSNNILSPAS GRPLAMPSLD MVTGVFHLSR LAEGALGEGR
SFSSVAEAQM AFDAREVALQ AKIRVRLRDT TPPSDWVPPA DWVTGDVFTL ETTFGRCLLN
EALPEGYPFI NAQLNKKAQA AIVNDLAERY PKIQVAATLD ALKSAGFYWA TRSGVTVAIE
DVVAPPNKAE ILDDYEQRAD RVQKQFDRGF LSDEERRSEL VQIWTEATNK IAEAMEENFP
ETNPVYVLVN SGAAGNMMQI RQLAGMRGLV SNPKGEIIPR PIKANFREGL TVLEYFISTH
GARKGLADTA LRTADSGYLT RRLVDVSQDV IVREEDCGTE RGILTRIARK GADGVLVRDR
YAETSAYART LASDAIDANG EVIVPAGTDA GDVAISQIIE AGIEQVRVRS ALTCESRMGV
CAQCYGRSLA TGKLVDVGEA VGIVAAQSIG EPGTQLTMRT FHSGGVAGDD ITQGLPRVVE
LFEARSPKGK APITEVSGRV KIEETEKTFK VVVVPDDGSD EIAYPVSRRS RLRVREGDHI
EVGSQIVDGA VDPHEVLRIL GPRQVQLHLV DQVQEVYRSQ GVSIHDKHIE IIIRQMLKRV
NVLESGDTTL LPGELCERAR FEAENRRVVE TGGQPASARP VLMGITKASL ATESWLSAAS
FQETTRVLTD AAINARSDSL VGLKENVIIG KLIPAGTGIS RYRNIRVEPT EEARAAMYSV
GAYEDGGVEY GAFGTGSGQA VPLDEFDYRS SGDFR
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